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Protein
Submitted name:

Methyl-accepting chemotaxis receptor/sensory transducer

Gene

RPA0139

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis receptor/sensory transducerImported
Gene namesi
Ordered Locus Names:RPA0139Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001426 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei314 – 33623HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA0139.

Structurei

3D structure databases

ProteinModelPortaliQ6NDG9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini336 – 38853HAMPInterPro annotationAdd
BLAST
Domaini432 – 647216Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili70 – 9728Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107R2Y. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiHASHGEQ.
OrthoDBiPOG091H0QRR.
PhylomeDBiQ6NDG9.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6NDG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLTVKAKLA GAFGVVILLS AITGGIAYVK LTQLAETSEG LVSRSQRIDK
60 70 80 90 100
AGELQNNILY QTRAQRDIII ASTDAELQKV ADEVKQYRKD ALRIRDEIAA
110 120 130 140 150
VATEAGKRMI EKFSTAYDKM NATEDQIIKF GTLNSNNRGA QLWTSEGAPV
160 170 180 190 200
VKDWSEAVES SLAEARKLPV SAERANALIS ILSIRADGEA VQKDLALSFY
210 220 230 240 250
ASNLEDLSST IKALGDATER LRSSSQQSVA ALSAVGLSSS AITSQSERFA
260 270 280 290 300
KIAGRVSDIV KEGGNIRAAA LAGTEGRATS MVAIQAATDY VNYVKKAMAE
310 320 330 340 350
MSEQAASDAA NAKLLLISIV IASLLAAVAS ALWIAINISR GLAQAVELAN
360 370 380 390 400
AVAIGDLSHK INSTSDDEVG DLVKSLNAMT ANLNATAGVA DEIARGNLTI
410 420 430 440 450
EAKRLSEKDT LGIALEQMVE KLRQIVSEAL TAAQNVSAGS QELSASAEQL
460 470 480 490 500
SQGATEQASS AEEASSSMEE MAANIKQNAE NASQTEKIAA QSAKDAEASG
510 520 530 540 550
AAVGRAVEAM QTIAEKITIV QEIARQTDLL ALNAAVEAAR AGEHGKGFAV
560 570 580 590 600
VASEVRKLAE RSQASATEIG ELSGETVKVA QEAGEMLAKL VPDIKKTSEL
610 620 630 640 650
VQEISSACRE QDVGSSQINQ AIQQLDKVGQ QNASASEQVS STSEELASQA
660 670 680 690 700
EQLQSTIAFF RIDQDKAKAH GAPIDKAVNQ LRAKAAHMAS VDRGTKKPQA
710 720 730
AKPQRQLKAA GGGGGFAFAL GDGEDDRDAD FQR
Length:733
Mass (Da):77,029
Last modified:July 5, 2004 - v1
Checksum:i5161F62D40722C90
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572593 Genomic DNA. Translation: CAE25583.1.
RefSeqiWP_011155707.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE25583; CAE25583; RPA0139.
KEGGirpa:RPA0139.
PATRICi23284381. VBIRhoPal84835_0143.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572593 Genomic DNA. Translation: CAE25583.1.
RefSeqiWP_011155707.1. NC_005296.1.

3D structure databases

ProteinModelPortaliQ6NDG9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA0139.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE25583; CAE25583; RPA0139.
KEGGirpa:RPA0139.
PATRICi23284381. VBIRhoPal84835_0143.

Phylogenomic databases

eggNOGiENOG4107R2Y. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiHASHGEQ.
OrthoDBiPOG091H0QRR.
PhylomeDBiQ6NDG9.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6NDG9_RHOPA
AccessioniPrimary (citable) accession number: Q6NDG9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.