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Q6NDG9 (Q6NDG9_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPA0139 EMBL CAE25583.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE25583.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length733 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE25583.1
   Molecular functionReceptor EMBL CAE25583.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3030 Potential EMBL CAE25583.1
Chain31 – 733703 Potential
PRO_5000096926

Sequences

Sequence LengthMass (Da)Tools
Q6NDG9 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 5161F62D40722C90

FASTA73377,029
        10         20         30         40         50         60 
MRLTVKAKLA GAFGVVILLS AITGGIAYVK LTQLAETSEG LVSRSQRIDK AGELQNNILY 

        70         80         90        100        110        120 
QTRAQRDIII ASTDAELQKV ADEVKQYRKD ALRIRDEIAA VATEAGKRMI EKFSTAYDKM 

       130        140        150        160        170        180 
NATEDQIIKF GTLNSNNRGA QLWTSEGAPV VKDWSEAVES SLAEARKLPV SAERANALIS 

       190        200        210        220        230        240 
ILSIRADGEA VQKDLALSFY ASNLEDLSST IKALGDATER LRSSSQQSVA ALSAVGLSSS 

       250        260        270        280        290        300 
AITSQSERFA KIAGRVSDIV KEGGNIRAAA LAGTEGRATS MVAIQAATDY VNYVKKAMAE 

       310        320        330        340        350        360 
MSEQAASDAA NAKLLLISIV IASLLAAVAS ALWIAINISR GLAQAVELAN AVAIGDLSHK 

       370        380        390        400        410        420 
INSTSDDEVG DLVKSLNAMT ANLNATAGVA DEIARGNLTI EAKRLSEKDT LGIALEQMVE 

       430        440        450        460        470        480 
KLRQIVSEAL TAAQNVSAGS QELSASAEQL SQGATEQASS AEEASSSMEE MAANIKQNAE 

       490        500        510        520        530        540 
NASQTEKIAA QSAKDAEASG AAVGRAVEAM QTIAEKITIV QEIARQTDLL ALNAAVEAAR 

       550        560        570        580        590        600 
AGEHGKGFAV VASEVRKLAE RSQASATEIG ELSGETVKVA QEAGEMLAKL VPDIKKTSEL 

       610        620        630        640        650        660 
VQEISSACRE QDVGSSQINQ AIQQLDKVGQ QNASASEQVS STSEELASQA EQLQSTIAFF 

       670        680        690        700        710        720 
RIDQDKAKAH GAPIDKAVNQ LRAKAAHMAS VDRGTKKPQA AKPQRQLKAA GGGGGFAFAL 

       730 
GDGEDDRDAD FQR 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572593 Genomic DNA. Translation: CAE25583.1.
RefSeqNP_945492.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6NDG9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA0139.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE25583; CAE25583; RPA0139.
GeneID2691452.
KEGGrpa:RPA0139.
PATRIC23284381. VBIRhoPal84835_0143.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148074.
KOK03406.
OMAHASHGEQ.
OrthoDBEOG6C8MTF.
PhylomeDBQ6NDG9.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6NDG9_RHOPA
AccessionPrimary (citable) accession number: Q6NDG9
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)