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Q6NDG3 (Q6NDG3_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPA0145 EMBL CAE25589.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE25589.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length388 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q6NDG3 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 17C369BD5A3BCF81

FASTA38842,853
        10         20         30         40         50         60 
MRIMLIQALV VDDSRSALDY LKRTIEADGQ VHVIAFTDPL EALSSARNID IDIVFADYEM 

        70         80         90        100        110        120 
PKMDGISLIR RLRSLPKFSD IPIVMITSIE SDEVRLQALD AGATDFLPKR PKSLETQVRL 

       130        140        150        160        170        180 
RNMIRLGSAV RKLNDRAALL ASEVARATHA LQEREEEIIL RLALSVEYRD NDTGDHTLRV 

       190        200        210        220        230        240 
AKYSRMIAEG LGLPERLCRD IYLAAPLHDV GKVATPDHIL LKPGKLTPDE IAVMQTHTTI 

       250        260        270        280        290        300 
GASILAGSRC ELIQLAADIA IGHHERWDGK GYPNKLKGAE IPIAARIVAV ADVFDALATA 

       310        320        330        340        350        360 
RPYKVAMPLP VARQHLENGR GQHFDPTCVD VFLARWDEVV AIATERLKLQ QTHDAPLQPS 

       370        380 
LPPDAREPTI TLPASNRKAG QMGLVPSE 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572593 Genomic DNA. Translation: CAE25589.1.
RefSeqNP_945498.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6NDG3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA0145.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE25589; CAE25589; RPA0145.
GeneID2688797.
KEGGrpa:RPA0145.
PATRIC23284393. VBIRhoPal84835_0149.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000266481.
KOK07814.
OMADNPRSRH.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK910803.

Family and domain databases

Gene3D1.10.3210.10. 1 hit.
InterProIPR011006. CheY-like_superfamily.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR006675. Uncharacterised_HDIG.
[Graphical view]
PfamPF01966. HD. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
TIGRFAMsTIGR00277. HDIG. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6NDG3_RHOPA
AccessionPrimary (citable) accession number: Q6NDG3
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)