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Protein
Submitted name:

Complete genome; segment 1/16

Gene

RPA0145

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Complete genome; segment 1/16Imported
Gene namesi
Ordered Locus Names:RPA0145Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA0145.

Structurei

3D structure databases

ProteinModelPortaliQ6NDG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000266481.
KOiK07814.
OMAiDNPRSRH.
OrthoDBiEOG6G4VQG.
PhylomeDBiQ6NDG3.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF01966. HD. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
TIGRFAMsiTIGR00277. HDIG. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6NDG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIMLIQALV VDDSRSALDY LKRTIEADGQ VHVIAFTDPL EALSSARNID
60 70 80 90 100
IDIVFADYEM PKMDGISLIR RLRSLPKFSD IPIVMITSIE SDEVRLQALD
110 120 130 140 150
AGATDFLPKR PKSLETQVRL RNMIRLGSAV RKLNDRAALL ASEVARATHA
160 170 180 190 200
LQEREEEIIL RLALSVEYRD NDTGDHTLRV AKYSRMIAEG LGLPERLCRD
210 220 230 240 250
IYLAAPLHDV GKVATPDHIL LKPGKLTPDE IAVMQTHTTI GASILAGSRC
260 270 280 290 300
ELIQLAADIA IGHHERWDGK GYPNKLKGAE IPIAARIVAV ADVFDALATA
310 320 330 340 350
RPYKVAMPLP VARQHLENGR GQHFDPTCVD VFLARWDEVV AIATERLKLQ
360 370 380
QTHDAPLQPS LPPDAREPTI TLPASNRKAG QMGLVPSE
Length:388
Mass (Da):42,853
Last modified:July 5, 2004 - v1
Checksum:i17C369BD5A3BCF81
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572593 Genomic DNA. Translation: CAE25589.1.
RefSeqiNP_945498.1. NC_005296.1.
WP_011155713.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE25589; CAE25589; RPA0145.
KEGGirpa:RPA0145.
PATRICi23284393. VBIRhoPal84835_0149.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572593 Genomic DNA. Translation: CAE25589.1.
RefSeqiNP_945498.1. NC_005296.1.
WP_011155713.1. NC_005296.1.

3D structure databases

ProteinModelPortaliQ6NDG3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA0145.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE25589; CAE25589; RPA0145.
KEGGirpa:RPA0145.
PATRICi23284393. VBIRhoPal84835_0149.

Phylogenomic databases

HOGENOMiHOG000266481.
KOiK07814.
OMAiDNPRSRH.
OrthoDBiEOG6G4VQG.
PhylomeDBiQ6NDG3.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF01966. HD. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
TIGRFAMsiTIGR00277. HDIG. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009Imported.

Entry informationi

Entry nameiQ6NDG3_RHOPA
AccessioniPrimary (citable) accession number: Q6NDG3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 27, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.