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Q6ND75 (Q6ND75_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPA0234 EMBL CAE25678.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE25678.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length563 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE25678.1
   Molecular functionReceptor EMBL CAE25678.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3333 Potential EMBL CAE25678.1
Chain34 – 563530 Potential
PRO_5000096945

Sequences

Sequence LengthMass (Da)Tools
Q6ND75 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: D7390B72F08E07F7

FASTA56358,781
        10         20         30         40         50         60 
MKIRLSITSM IVAFAVVVLV SLTAMLTTNF MALNQLRVGG PLYSQIKLGN DLVADILPPP 

        70         80         90        100        110        120 
AYVIEAYLEA TLALRRPTEW RAHAAKLEQL HRDYLDRQKY WSGSELDPVL KTRLTVDSDA 

       130        140        150        160        170        180 
AVQKFWRAAE QELIPALSAG DEAAAEAAYT KLDASYAAHR AIIDDIVKRA NAENAELETE 

       190        200        210        220        230        240 
AARQVGSYST IVWILSGFAA LLIALGVAGL AVGMVRPLVR LTAAMQAMAA GMLDVVIPGA 

       250        260        270        280        290        300 
GRSDEIGGMA KAITAIKTNA EHKANQEAAE KSRQEHLVAE QRKADMARLA DGFEDAVGEI 

       310        320        330        340        350        360 
IKTVSSAANE LEAAAHSLSS TAARSLELAV GVASSSQEAS AGVQSVASAS EELTASVHEI 

       370        380        390        400        410        420 
GRQVQTSANV ANEAADQARQ TNERVSELSA AAARIGDVVE LISNIAGQTN LLALNATIEA 

       430        440        450        460        470        480 
ARAGEAGRGF AVVASEVKAL AEQTGKATGE IGQQITGIQA ATGESVAAIK EICSIIGQMS 

       490        500        510        520        530        540 
EISSSIASAV EEQGMATKDI AVNIQHAAHG TSQVDQDIAR VQAGARETGA ASVQVLSAAK 

       550        560 
SLSSESSRLR AEVGNFLASV RAA 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572593 Genomic DNA. Translation: CAE25678.1.
RefSeqNP_945587.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6ND75.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA0234.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE25678; CAE25678; RPA0234.
GeneID2689602.
KEGGrpa:RPA0234.
PATRIC23284585. VBIRhoPal84835_0244.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
OMARITISAM.
OrthoDBEOG6F2940.
PhylomeDBQ6ND75.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6ND75_RHOPA
AccessionPrimary (citable) accession number: Q6ND75
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)