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Protein
Submitted name:

Methyl-accepting chemotaxis receptor/sensory transducer

Gene

RPA0234

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis receptor/sensory transducerImported
Gene namesi
Ordered Locus Names:RPA0234Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3322HelicalSequence analysisAdd
BLAST
Transmembranei191 – 21525HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA0234.

Structurei

3D structure databases

ProteinModelPortaliQ6ND75.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini212 – 26554HAMPInterPro annotationAdd
BLAST
Domaini300 – 543244Methyl-accepting transducerInterPro annotationAdd
BLAST
Domaini459 – 52163T-SNARE coiled-coil homologyInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili160 – 18728Sequence analysisAdd
BLAST
Coiled coili371 – 39121Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiCOG0840. LUCA.
ENOG4108RKA. Bacteria.
HOGENOMiHOG000148079.
OMAiDNVVNTM.
OrthoDBiEOG6F2940.
PhylomeDBiQ6ND75.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6ND75-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIRLSITSM IVAFAVVVLV SLTAMLTTNF MALNQLRVGG PLYSQIKLGN
60 70 80 90 100
DLVADILPPP AYVIEAYLEA TLALRRPTEW RAHAAKLEQL HRDYLDRQKY
110 120 130 140 150
WSGSELDPVL KTRLTVDSDA AVQKFWRAAE QELIPALSAG DEAAAEAAYT
160 170 180 190 200
KLDASYAAHR AIIDDIVKRA NAENAELETE AARQVGSYST IVWILSGFAA
210 220 230 240 250
LLIALGVAGL AVGMVRPLVR LTAAMQAMAA GMLDVVIPGA GRSDEIGGMA
260 270 280 290 300
KAITAIKTNA EHKANQEAAE KSRQEHLVAE QRKADMARLA DGFEDAVGEI
310 320 330 340 350
IKTVSSAANE LEAAAHSLSS TAARSLELAV GVASSSQEAS AGVQSVASAS
360 370 380 390 400
EELTASVHEI GRQVQTSANV ANEAADQARQ TNERVSELSA AAARIGDVVE
410 420 430 440 450
LISNIAGQTN LLALNATIEA ARAGEAGRGF AVVASEVKAL AEQTGKATGE
460 470 480 490 500
IGQQITGIQA ATGESVAAIK EICSIIGQMS EISSSIASAV EEQGMATKDI
510 520 530 540 550
AVNIQHAAHG TSQVDQDIAR VQAGARETGA ASVQVLSAAK SLSSESSRLR
560
AEVGNFLASV RAA
Length:563
Mass (Da):58,781
Last modified:July 5, 2004 - v1
Checksum:iD7390B72F08E07F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572593 Genomic DNA. Translation: CAE25678.1.
RefSeqiWP_011155802.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE25678; CAE25678; RPA0234.
KEGGirpa:RPA0234.
PATRICi23284585. VBIRhoPal84835_0244.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572593 Genomic DNA. Translation: CAE25678.1.
RefSeqiWP_011155802.1. NC_005296.1.

3D structure databases

ProteinModelPortaliQ6ND75.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA0234.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE25678; CAE25678; RPA0234.
KEGGirpa:RPA0234.
PATRICi23284585. VBIRhoPal84835_0244.

Phylogenomic databases

eggNOGiCOG0840. LUCA.
ENOG4108RKA. Bacteria.
HOGENOMiHOG000148079.
OMAiDNVVNTM.
OrthoDBiEOG6F2940.
PhylomeDBiQ6ND75.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009Imported.

Entry informationi

Entry nameiQ6ND75_RHOPA
AccessioniPrimary (citable) accession number: Q6ND75
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 9, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.