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Q6ND47 (RBLL2_RHOPA) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribulose bisphosphate carboxylase-like protein 2

Short name=RuBisCO-like protein
Gene names
Name:rlp2
Ordered Locus Names:RPA0262
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity By similarity.

Cofactor

Binds 1 magnesium ion per subunit By similarity.

Subunit structure

Homodimer.

Sequence similarities

Belongs to the RuBisCO large chain family. Type IV subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 432432Ribulose bisphosphate carboxylase-like protein 2
PRO_0000062683

Sites

Metal binding1981Magnesium; via carbamate group Potential
Metal binding2001Magnesium By similarity
Metal binding2011Magnesium By similarity

Amino acid modifications

Modified residue1981N6-carboxylysine Potential

Secondary structure

....................................................................... 432
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q6ND47 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 1C02E95D7430C620

FASTA43246,464
        10         20         30         40         50         60 
MTPDDIAGFY AKRADLDLDN YIELDFDFEC AGDPHEAAAH LCSEQSTAQW RRVGFDEDFR 

        70         80         90        100        110        120 
PRFAAKVLEL SAEPRPSGFS VPVECAARGP VHACRVTIAH PHGNFGAKIP NLLSAVCGEG 

       130        140        150        160        170        180 
VFFSPGIPLI RLQDIRFPEP YLAAFDGPRF GIAGVRERLQ AFDRPIFFGV IKPNIGLPPQ 

       190        200        210        220        230        240 
PFAELGYQSW TGGLDIAKDD EMLADVDWCP LAERAALLGD ACRRASAETG VPKIYLANIT 

       250        260        270        280        290        300 
DEVDRLTELH DVAVANGAGA LLINAMPVGL SAVRMLRKHA TVPLIAHFPF IAAFSRLANY 

       310        320        330        340        350        360 
GIHSRVMTRL QRLAGFDVVI MPGFGPRMMT PEHEVLDCIR ACLEPMGPIK PCLPVPGGSD 

       370        380        390        400        410        420 
SAATLENVYR KVGSADFGFV PGRGVFGHPM GPAAGATSIR QAWDAIAAGI PVPDHAASHP 

       430 
ELAAALRAFG GR 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572593 Genomic DNA. Translation: CAE25706.1.
RefSeqNP_945615.1. NC_005296.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2QYGX-ray3.30A/B/C/D1-432[»]
ProteinModelPortalQ6ND47.
SMRQ6ND47. Positions 1-429.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA0262.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE25706; CAE25706; RPA0262.
GeneID2689874.
KEGGrpa:RPA0262.
PATRIC23284653. VBIRhoPal84835_0277.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAFECAGDP.
OrthoDBEOG62K1SK.
PhylomeDBQ6ND47.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ6ND47.

Entry information

Entry nameRBLL2_RHOPA
AccessionPrimary (citable) accession number: Q6ND47
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2005
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references