Q6NCH9 (RL28_RHOPA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L28

Alternative name(s):
RRP-L28

Gene names

Name:	rpmB
Ordered Locus Names:	RPA0493

Organism

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]

Taxonomic identifier

258594 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	101 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Miscellaneous	The initiator methionine may be removed. HAMAP MF_00373
Sequence similarities	Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 101	101	50S ribosomal protein L28 HAMAP MF_00373		PRO_0000178537

Sequences

	Sequence		Length	Mass (Da)
	Q6NCH9 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: CBF6B136F96AC824	FASTA	101	10,979
	10 20 30 40 50 60 MSRRCELTAK GAQVGHKVSH SNIKTKRRFL PNLVNVTFLS DTLGRAVRLR VSTNALKSVD 70 80 90 100 HRGGLDAYLL KAREAELSPK AVELKRAIAK KMAGEPVAAA S

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris." Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S. Nat. Biotechnol. 22:55-61(2004) [PubMed: 14704707] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-98 / CGA009.
[2]	"Characterization of the 70S ribosome from Rhodopseudomonas palustris using an integrated 'top-down' and 'bottom-up' mass spectrometric approach." Strader M.B., VerBerkmoes N.C., Tabb D.L., Connelly H.M., Barton J.W., Bruce B.D., Pelletier D.A., Davison B.H., Hettich R.L., Larimer F.W., Hurst G.B. J. Proteome Res. 3:965-978(2004) [PubMed: 15473684] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY. Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX572594 Genomic DNA. Translation: CAE25937.1.
RefSeq	NP_945846.1. NC_005296.1.
3D structure databases
ProteinModelPortal	Q6NCH9.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q6NCH9. 1 interaction.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2688769.
GenomeReviews	Gene locus RPA0493 in contig BX571963_GR.
KEGG	rpa:RPA0493.
NMPDR	fig|258594.1.peg.490.
PATRIC	23285149. VBIRhoPal84835_0521.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG597003.
OMA	ELSMRAR.
ProtClustDB	PRK00359.
Enzyme and pathway databases
BioCyc	RPAL258594:RPA0493-MONOMER.
Family and domain databases
HAMAP	MF_00373. Ribosomal_L28. [Tree]
InterPro	IPR001383. Ribosomal_L28. [Graphical view]
KO	K02902.
Pfam	PF00830. Ribosomal_L28. 1 hit. [Graphical view]
TIGRFAMs	TIGR00009. L28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL28_RHOPA

Accession

Primary (citable) accession number: Q6NCH9

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 7, 2005
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program