Q6NBF6 (Q6NBF6_RHOPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative peptidyl-dipeptidase EMBL CAE26316.1

Gene names

Ordered Locus Names:

RPA0872 EMBL CAE26316.1

Organism

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE26316.1

Taxonomic identifier

258594 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	696 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Binds 1 zinc ion By similarity. RuleBase RU003435
Sequence similarities	Belongs to the peptidase M3 family. RuleBase RU003435

Ontologies

Keywords
Ligand	Zinc RuleBase RU003435
Molecular function	Hydrolase Metalloprotease RuleBase RU003435 Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6NBF6 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: E57A622FB3C4B423	FASTA	696	77,741
	10 20 30 40 50 60 MSESSGPIAA PADAGNPLLA AWTTPFETPP FAEIRPEHFM PAFEQAFADH AGEIAAIVND 70 80 90 100 110 120 PTEPDFDNTV TALERSGKLL NRVAAVFYDL VSAHSSPELL KIDEEVSLRM ARHWNPIMMN 130 140 150 160 170 180 AVLFGRIAAL RDKAARLNLT PEQSRLLERS YTRFHRAGAG LDEASKARMA AINERLAQLG 190 200 210 220 230 240 TSFSHHLLGD EQEWMMELGE GDTEGLPDSF VAAARAAAEE RGLPGKAVVT LSRSSVEPFL 250 260 270 280 290 300 KMSSRRDLRE KVYRAFIARG DNGNDNDNNA IIGEILSLRE ESAKLLGYPT FAAYRLEDSM 310 320 330 340 350 360 AKTPEAVRGL LERVWKPARA RALADRDALQ ELVTEEGSNF KLAPWDWRYY AERLRQRRAN 370 380 390 400 410 420 FDDAAIKPYL TLDGMIAAAF DTATRLFGIT FEERKDVPVW HPDVRVWEVK DADGAHRGLF 430 440 450 460 470 480 YGDYYARPSK RSGAWMTSLR DQQKLDSAVA PLIINVCNFA KGAGGEPSLL SPDDARTLFH 490 500 510 520 530 540 EFGHGLHGML SDVTYPSLSG TSVFTDFVEL PSQLYEHWQE QPQVLRQFAR HYQTGEPLPD 550 560 570 580 590 600 DLLQRFIAAR KFGQGFATVE FVSSALLDLE FHTQPAASIG EVRAFERKEL DKIGMPEEIA 610 620 630 640 650 660 LRHRPTQFGH IFSGDHYASG YYSYMWSEVM DADAFGAFEE AGDIFAPDVA KRLRDDIYSS 670 680 690 GGSRDPEEAY VAFRGRKPEP DALLRRRGLL DTPEAA

References

[1]

"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris." Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H., Gibson J., Harwood C.S. Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX572595 Genomic DNA. Translation: CAE26316.1.
RefSeq	NP_946225.1. NC_005296.1.
3D structure databases
ProteinModelPortal	Q6NBF6.
ModBase	Search...
Protein-protein interaction databases
STRING	258594.RPA0872.
Protein family/group databases
MEROPS	M03.005.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAE26316; CAE26316; RPA0872.
GeneID	2689930.
KEGG	rpa:RPA0872.
PATRIC	23285947. VBIRhoPal84835_0917.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000245984.
KO	K01284.
OMA	YRLEDSM.
ProtClustDB	CLSK820596.
Family and domain databases
Gene3D	1.10.1370.10. 2 hits. 1.20.1050.40. 1 hit. 3.40.390.10. 1 hit.
InterPro	IPR024079. MetalloPept_cat_dom. IPR024077. Neurolysin/TOP_dom2. IPR024080. Neurolysin/TOP_N. IPR001567. Pept_M3A_M3B. [Graphical view]
Pfam	PF01432. Peptidase_M3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6NBF6_RHOPA

Accession

Primary (citable) accession number: Q6NBF6

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)