Q6N9M6 (Q6N9M6_RHOPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative coproporphyrinogen III oxidase EMBL CAE26956.1

Gene names

Name:	hemF EMBL CAE26956.1
Ordered Locus Names:	RPA1514

Organism

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]

Taxonomic identifier

258594 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	303 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III By similarity. SAAS SAAS001260
Catalytic activity	Coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O. SAAS SAAS001260
Pathway	Porphyrin metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (O2 route): step 1/1. SAAS SAAS001260
Subunit structure	Homodimer By similarity. SAAS SAAS001260

Ontologies

Keywords
Biological process	Porphyrin biosynthesis SAAS SAAS001260
Molecular function	Oxidoreductase SAAS SAAS001260
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	porphyrin-containing compound biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	coproporphyrinogen oxidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6N9M6 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: F37DBE055AE13015	FASTA	303	33,661
	10 20 30 40 50 60 MTIDTDLDRT PAASSENPVE ARRTQARAWF EGLRDRICAE IETLEREAPA ELFPGEPATF 70 80 90 100 110 120 TYKPWQRKTG AGGGVGGFLS NGRLFEKIGI HTSSANGKLT PEMAKNVPGD GSLDYVSTSI 130 140 150 160 170 180 SLIMHPRSPR VPTVHMNTRF LSTSQGWFGG GADLTPMLPE QRSQDAEDAV IFHTAMKHAC 190 200 210 220 230 240 DAHDPAYYDK FKPWADTYFF LPHRGVARGV GGIFFDYLNS GDFDRDFAFT RAVGSALLDV 250 260 270 280 290 300 YPKIVRKRMI EPWTDAERAQ QLACRGLYVE FNLLYDRGTM FGLQTGGNTE TIMSSMPPLV SWS

References

[1]

"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris." Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S. Nat. Biotechnol. 22:55-61(2004) [PubMed: 14704707] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX572597 Genomic DNA. Translation: CAE26956.1.
RefSeq	NP_946862.1. NC_005296.1.
3D structure databases
ProteinModelPortal	Q6N9M6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2691498.
GenomeReviews	Gene locus RPA1514 in contig BX571963_GR.
KEGG	rpa:RPA1514.
NMPDR	fig|258594.1.peg.1506.
PATRIC	23287267. VBIRhoPal84835_1573.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG631180.
OMA	VKAYLLD.
ProtClustDB	PRK05330.
Enzyme and pathway databases
BioCyc	RPAL258594:RPA1514-MONOMER.
Family and domain databases
InterPro	IPR001260. Coprogen_oxidase_aer. [Graphical view]
Gene3D	G3DSA:3.40.1500.10. Coprogen_oxidas. 1 hit.
KO	K00228.
PANTHER	PTHR10755. Coprogen_oxidas. 1 hit.
Pfam	PF01218. Coprogen_oxidas. 1 hit. [Graphical view]
PIRSF	PIRSF000166. Coproporphyri_ox. 1 hit.
PRINTS	PR00073. COPRGNOXDASE.
SUPFAM	SSF102886. Coprogen_oxidas. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6N9M6_RHOPA

Accession

Primary (citable) accession number: Q6N9M6

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)