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Q6N8D8 (Q6N8D8_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPA1965 EMBL CAE27406.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE27406.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length662 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential EMBL CAE27406.1
Chain25 – 662638 Potential
PRO_5000097275

Sequences

Sequence LengthMass (Da)Tools
Q6N8D8 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: FD9F9E3D77CC77F8

FASTA66272,626
        10         20         30         40         50         60 
MKFTTRLVLL VTVLTVGATL VTAALLTWTT RRAIITEAEA SGEKVARLLA RSASLAASIP 

        70         80         90        100        110        120 
TEVEGIIAEE MTAEGTLLGH FVEAAERAGM TPTEINRRLK SITDDTVLDE IWITDEKGHA 

       130        140        150        160        170        180 
YLHSLPDVNF TFSNSPQLQP QAYAFYDLLN GQKKVVNQDA RKRDIDNQHF KYVGVGGIDK 

       190        200        210        220        230        240 
PRIIQVGRSA KFLQQLTMKI GLPRTVENLL ADGDIDAVWV FDRKLDALVG PGVYGADRRD 

       250        260        270        280        290        300 
GPNEKELGPV RLVIADGQTR HVESRQNLSV IAPVRNDQKE IVGAALVRLP MNRVWATVQS 

       310        320        330        340        350        360 
QAEIAAATAS AIAALGILLS IGVARYQAAP LRQITRAAVA LETQKFDPAL LKPVSARRDE 

       370        380        390        400        410        420 
LGQLARVFTG MAGQVAAREE YLDSMVKQRT EELETRNRSL EGLSAALSKY LSPQVYSSIF 

       430        440        450        460        470        480 
SGHQDAEIAS KRKKLTIFLS DIANFTATTD KLESEDLTAM LNRYLAEMAQ IALKHGATID 

       490        500        510        520        530        540 
KYVGDAVLAF FGDPDSRGVK EDAVACVMMA IEMQEKLKQL EMEWIDAGAE RPFRVRIGIN 

       550        560        570        580        590        600 
TGFCTVGNFG SPDRMDYTIV GGAVNLTSRL EQNCEPGSIL ISHVTWSLVN DVIDAEERPA 

       610        620        630        640        650        660 
LTVKGFSEPV RAYEVRGLKT SGSTDVIRKE LPGMRLFIDT VTADRTEVKQ TLVQVVEDLD 


KS 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572599 Genomic DNA. Translation: CAE27406.1.
RefSeqNP_947310.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N8D8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA1965.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE27406; CAE27406; RPA1965.
GeneID2689017.
KEGGrpa:RPA1965.
PATRIC23288245. VBIRhoPal84835_2059.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000066951.
OMAAMLNRYL.
OrthoDBEOG690M9K.

Family and domain databases

Gene3D3.30.70.1230. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR003660. HAMP_linker_domain.
[Graphical view]
PfamPF00211. Guanylate_cyc. 1 hit.
PF00672. HAMP. 1 hit.
[Graphical view]
SMARTSM00044. CYCc. 1 hit.
SM00304. HAMP. 1 hit.
[Graphical view]
SUPFAMSSF55073. SSF55073. 1 hit.
PROSITEPS50125. GUANYLATE_CYCLASE_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N8D8_RHOPA
AccessionPrimary (citable) accession number: Q6N8D8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)