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Q6N6D1 (Q6N6D1_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Dihydrodipicolinate synthase EMBL CAE28127.1
EC=4.2.1.52 EMBL CAE28127.1
Gene names
Name:dapA2 EMBL CAE28127.1
Ordered Locus Names:RPA2686
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Sequences

Sequence LengthMass (Da)Tools
Q6N6D1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 0FC94618EE7C5003

FASTA29731,761
        10         20         30         40         50         60 
MMAAKTKFRG SFTALVTPFK NGALDEQAFR SLVNWQIEQG THGLVPVGTT GESPTLSHEE 

        70         80         90        100        110        120 
HHKVVEWCIA EAKGRVPVIA GAGSNSTREA VELARHAEKA GADAVLVVTP YYNKPTQEGM 

       130        140        150        160        170        180 
YQHFKAVNDA IGIPIIIYNI PPRSVVDMSV DTMSRLYELD NIVGVKDATA NLGRVSQQRH 

       190        200        210        220        230        240 
AMGPDFIQLS GEDMTALAYM AAGGHGCISV VSNIAPKLCS DLMGAVFAGD YPGALKIQDR 

       250        260        270        280        290 
LVPLHDAVFK EPGVAGAKHG LTLLGRIQED VRLPLMTVTE PTGKAIRAAM VHAGVIN

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed: 14704707] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BX572601 Genomic DNA. Translation: CAE28127.1.
RefSeqNP_948028.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N6D1.
SMRQ6N6D1. Positions 8-293.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2693240.
GenomeReviewsGene locus RPA2686 in contig BX571963_GR.
KEGGrpa:RPA2686.
NMPDRfig|258594.1.peg.2671.
PATRIC23289789. VBIRhoPal84835_2822.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG358848.
OMAHGCISVV.
ProtClustDBPRK03170.

Enzyme and pathway databases

BioCycRPAL258594:RPA2686-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR020624. Dihydrodipicolinate_synth_CS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00665. DHDPS_1. 1 hit.
PS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N6D1_RHOPA
AccessionPrimary (citable) accession number: Q6N6D1
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 14, 2011
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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