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Q6N5W6

- SYR_RHOPA

UniProt

Q6N5W6 - SYR_RHOPA

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:RPA2854
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 597597Arginine--tRNA ligasePRO_0000242079Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi258594.RPA2854.

Structurei

3D structure databases

ProteinModelPortaliQ6N5W6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi138 – 14811"HIGH" regionAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247214.
KOiK01887.
OMAiLCNVLAK.
OrthoDBiEOG6JB13C.
PhylomeDBiQ6N5W6.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6N5W6 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAELPMSTHL FARLLSRVHA VCAALIEEGA LPAGIDLSRV VVEPPKDASH
60 70 80 90 100
GDMATNAAMV LAKDAKAKPR DLADKIADKL RAEELIDQVA IAGPGFINLT
110 120 130 140 150
LKPAVWAEAL RAVLDAGAGY GRSTVGGGEK VNVEYVSANP TGPMHVGHCR
160 170 180 190 200
GAVFGDALAN LLDTAGYDVT REYYINDAGA QVDVLARSAF LRYREALGET
210 220 230 240 250
IGEIPEGLYP GDYLKPVGEA LKAEHGAALK DMPEAQWLPT VRATAIAMMM
260 270 280 290 300
EAIKGDLAAL NITHEVFFSE RSLIEGGRNR VAETIEFLRA KGDVYQGRLP
310 320 330 340 350
PPKGAPVEDY EDREQTLFRA TAYGDDVDRP LLKSDGSYTY FASDIAYHKV
360 370 380 390 400
KFDAGFANMV DVWGADHGGY IKRMQAAIQA VTAGKGALDV KIVQLVRLLR
410 420 430 440 450
NGEPVKMSKR AGDFVTLREV VDEVGSDAVR FMMLFRKNDA VLDFDLAKVI
460 470 480 490 500
EQSKDNPVFY VQYGHARGHS IFRNAREVVP DLPEDSKARA AMLRQAPLER
510 520 530 540 550
LNDPAELELL KRLALYPRIV EAAAQAHEPH RIAFYLNELA SEFHALWTHG
560 570 580 590
RDLPHLRFII NNDAEITRAR LAMVQGVVSV LASGLAILGV TAPDEMR
Length:597
Mass (Da):65,197
Last modified:July 5, 2004 - v1
Checksum:i301A2725A2181383
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX572602 Genomic DNA. Translation: CAE28295.1.
RefSeqiNP_948195.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE28295; CAE28295; RPA2854.
GeneIDi2693472.
KEGGirpa:RPA2854.
PATRICi23290133. VBIRhoPal84835_2993.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX572602 Genomic DNA. Translation: CAE28295.1 .
RefSeqi NP_948195.1. NC_005296.1.

3D structure databases

ProteinModelPortali Q6N5W6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 258594.RPA2854.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE28295 ; CAE28295 ; RPA2854 .
GeneIDi 2693472.
KEGGi rpa:RPA2854.
PATRICi 23290133. VBIRhoPal84835_2993.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247214.
KOi K01887.
OMAi LCNVLAK.
OrthoDBi EOG6JB13C.
PhylomeDBi Q6N5W6.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009.

Entry informationi

Entry nameiSYR_RHOPA
AccessioniPrimary (citable) accession number: Q6N5W6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3