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Protein
Submitted name:

Complete genome; segment 12/16

Gene

RPA3546

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Complete genome; segment 12/16Imported
Gene namesi
Ordered Locus Names:RPA3546Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PotentialImportedAdd
BLAST
Chaini27 – 651625 PotentialImportedPRO_5000097624Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA3546.

Structurei

3D structure databases

ProteinModelPortaliQ6N3Z6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000148079.
KOiK03406.
OMAiNNITHMY.
OrthoDBiEOG693GJ9.
PhylomeDBiQ6N3Z6.

Family and domain databases

InterProiIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6N3Z6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKSISARMI VAITLVAIGS CVVLAGFSVW RQKATIDVAL ERELRADFAN
60 70 80 90 100
ITAATEAETR TTLALSDVLA ALPPLRELTK ASDRDGLMKL LKEGRDLTTL
110 120 130 140 150
RGLSLYTIQV PPATTLMRIH NPKTFGDDVS GRRAMVVQAM TTGKAVGGIE
160 170 180 190 200
PGLDNLTVFG TTPMVEDGKV IGTVDIGAPF GKAFVERMKA RFGVDVAILQ
210 220 230 240 250
INGDKTNVIA SSLPNPVTDL ATLRRAFGGE LMIEKGEADG KAIATTFGPL
260 270 280 290 300
KRFSGEPVAV LMIARDASAY AALERQSMQW LAFAAIVAVL AAAAIAIWLG
310 320 330 340 350
RSMAKPIQAL GNAMRDISSG RHDVEVPGRG RSDEIGLMAQ AVEVFKEGLI
360 370 380 390 400
ETGRLRAAQD EQRITHETER RKAMHELAAR FETGVGSVVE LVGSAATELR
410 420 430 440 450
GTADSMVGTA RESERRLVAA TAASQQATSN AQAVAAAVEE LDASITEIGN
460 470 480 490 500
RVDQSARVAG EAATQAGRTN EEVRSLAEAA QKIGEVVTLI SDIASQTNLL
510 520 530 540 550
ALNATIEAAR AGDAGRGFAV VAAEVKALAE QTSKATEEIT TQINSIQQAT
560 570 580 590 600
QSSVQAIEGI TGTVAQINEI ATAIASAVRE QSAATREIAH NVAESARSTT
610 620 630 640 650
EVSSNISGVN EAARETGVAA GQVVESASEL SRSGEALKTQ VDTFLREVRA

A
Length:651
Mass (Da):68,350
Last modified:July 5, 2004 - v1
Checksum:i1481CFBB0E40722E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572604 Genomic DNA. Translation: CAE28987.1.
RefSeqiNP_948884.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE28987; CAE28987; RPA3546.
KEGGirpa:RPA3546.
PATRICi23291615. VBIRhoPal84835_3723.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572604 Genomic DNA. Translation: CAE28987.1.
RefSeqiNP_948884.1. NC_005296.1.

3D structure databases

ProteinModelPortaliQ6N3Z6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA3546.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE28987; CAE28987; RPA3546.
KEGGirpa:RPA3546.
PATRICi23291615. VBIRhoPal84835_3723.

Phylogenomic databases

HOGENOMiHOG000148079.
KOiK03406.
OMAiNNITHMY.
OrthoDBiEOG693GJ9.
PhylomeDBiQ6N3Z6.

Family and domain databases

InterProiIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009Imported.

Entry informationi

Entry nameiQ6N3Z6_RHOPA
AccessioniPrimary (citable) accession number: Q6N3Z6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 29, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.