Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP-dependent DNA ligase

Gene

RPA3650

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciRPAL258594:G1GT2-3759-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RPA3650Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001426 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ6N3P3

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA3650

Structurei

3D structure databases

ProteinModelPortaliQ6N3P3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini372 – 458DNA_LIGASE_A3InterPro annotationAdd BLAST87

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
HOGENOMiHOG000222509
KOiK01971
OMAiAMMVEDH
OrthoDBiPOG091H0AZ9
PhylomeDBiQ6N3P3

Family and domain databases

CDDicd04862 PaeLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR012340 NA-bd_OB-fold
IPR014143 NHEJ_ligase_prk
IPR033651 PaeLigD_Pol-like
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
TIGR02776 NHEJ_ligase_prk, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

Q6N3P3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASNKLSIYR KKRDFEQTAE PRGDAKVAPS KQRRFVIQKH DATRLHYDLR
60 70 80 90 100
LEYGGVFKSW AVTKGPSLDP NDKRLAVEVE DHPLDYGDFE GTIPKGQYGG
110 120 130 140 150
GTVQLWDRGY WECDDPERGF KTGDLKFTLH GEKLHGSWVL VRMRHDRSGG
160 170 180 190 200
KRTNWLLIKH RDDDAREGDA NTVLDEDRSV ASGRAMDTIA EGKGKAPKPF
210 220 230 240 250
MLRKAATRVT ADAVWDSNTG LAADKRAETG AAKKVAKSKP TTSAKAKAAK
260 270 280 290 300
SAKPASRSKP AAQGKRAAMP DFVPPQLCTS VERPPGGEGW GHEIKFDGYR
310 320 330 340 350
MQLRVEHGEA RLLTRKGLDW TAKFGAIADE AASLPDAIID TEVVALDSHG
360 370 380 390 400
QPDFASLQAA LSDGHTENLI CFAFDLLYVD GEDLRGLPLA ERKARLAALL
410 420 430 440 450
KAARGRRKEG LIRYVEHFDT GGDAILQSAC KLSLEGIVSK KLDAAYRSGR
460 470 480 490 500
SDGWTKAKCR AGHEVVIGGW KTTNGKFRSL LVGVHRGDDL AYVGIVGTGF
510 520 530 540 550
GQDVVKRILP ELKAHKADTS PFSGANAPKK TREVHWVTPD LVAEIEFAGF
560 570 580 590 600
TGAGMVRQAS FKGLRADKPA EEVEAEEPQR VELAEPAPMR RIAKASKSGK
610 620 630 640 650
PAAKRAAPRR ADAARSEVMG VAISKPDKEL WPASEIGAAI TKRDLADYFA
660 670 680 690 700
EVGDWLIPHI KGRPCSILRA PDGIDGEHFF QRHAMPGMSN LIGLAKVSGD
710 720 730 740 750
RKPYVQIDRV EGLIAAAQIG GVELHPWNCA PNRYDVPGRL VFDLDPAPEV
760 770 780 790 800
GFDEVITAAK EMKQRLEALG LKTFCKTTGG KGLHVVVPLK PDDGIDWKAA
810 820 830 840 850
KTFAQTVCAQ MAEDSPEQYL LNMSKRKRIG KIFLDYLRND RMSTAVAVLS
860 870 880 890 900
PRARTGATVS MPLTWSQVKA GLDPKRYTIE SVPALIKRSK AWTDYDDAAT
910
PLKAAIRTLT SGKT
Length:914
Mass (Da):99,962
Last modified:July 5, 2004 - v1
Checksum:iBC40ABEC6A8BD78A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572604 Genomic DNA Translation: CAE29091.1
RefSeqiWP_011159189.1, NC_005296.1

Genome annotation databases

EnsemblBacteriaiCAE29091; CAE29091; RPA3650
KEGGirpa:RPA3650

Similar proteinsi

Entry informationi

Entry nameiQ6N3P3_RHOPA
AccessioniPrimary (citable) accession number: Q6N3P3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health