Q6N362 (Q6N362_RHOPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative diguanylate cyclase (GGDEF) with PAS/PAC domain EMBL CAE29273.1

Gene names

Ordered Locus Names:

RPA3832

Organism

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]

Taxonomic identifier

258594 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	356 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6N362 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 725060C6ADF5582D	FASTA	356	39,596
	10 20 30 40 50 60 MRLPRWRAPA RGARATATRA PTLIRDMPDR GHDGPGQPHP SEPLCQATLC ECLNENALLA 70 80 90 100 110 120 KYAIDRIADM IIWLDEHGRV MFVNAAATKL LGYSQAEFLS MTVLDLDPLF DADIWRDHWR 130 140 150 160 170 180 EVESRGSFTL ETVNRTKDGV DVAVEVTVNF VECLGRKMNC SIVRDITERK RAAEQLAEMH 190 200 210 220 230 240 RKLVQANLTD ELTAIANRRR FDGVLSTSYA THMRSGAPLS LILLDIDHFK AFNDRYGHLE 250 260 270 280 290 300 GDRCLQRIAE VIDRRMFRAA DLAARWGGEE FVCILPDTDE AGALAVATAL REAILDLAIP 310 320 330 340 350 HEASPIARVV TASLGVVTAT CVPDKTAHSL FETADALLYE AKNLGRNRIV RSPSRG

References

[1]

"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris." Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S. Nat. Biotechnol. 22:55-61(2004) [PubMed: 14704707] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX572605 Genomic DNA. Translation: CAE29273.1.
RefSeq	NP_949169.1. NC_005296.1.
3D structure databases
ProteinModelPortal	Q6N362.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2690021.
GenomeReviews	Gene locus RPA3832 in contig BX571963_GR.
KEGG	rpa:RPA3832.
NMPDR	fig|258594.1.peg.3812.
PATRIC	23292213. VBIRhoPal84835_4022.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG638920.
OMA	VFANEAF.
ProtClustDB	CLSK924296.
Enzyme and pathway databases
BioCyc	RPAL258594:RPA3832-MONOMER.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001610. PAC. IPR000014. PAS. IPR013656. PAS_4. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF08448. PAS_4. 1 hit. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6N362_RHOPA

Accession

Primary (citable) accession number: Q6N362

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)