Q6N2R2 (Q6N2R2_RHOPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Possible phosphoheptose isomerase EMBL CAE29428.1

Gene names

Name:	lpcA EMBL CAE29428.1
Ordered Locus Names:	RPA3987

Organism

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]

Taxonomic identifier

258594 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	195 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate By similarity. SAAS SAAS020620
Catalytic activity	D-sedoheptulose 7-phosphate = D-glycero-D-manno-heptose 7-phosphate. SAAS SAAS020620
Cofactor	Binds 1 zinc ion per subunit By similarity. SAAS SAAS020620
Pathway	Carbohydrate biosynthesis; D-glycero-D-manno-heptose 7-phosphate biosynthesis; D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate from sedoheptulose 7-phosphate: step 1/1. SAAS SAAS020620
Subcellular location	Cytoplasm By similarity SAAS SAAS020620.
Sequence similarities	Contains 1 SIS domain. SAAS SAAS020620

Ontologies

Keywords
Biological process	Carbohydrate metabolism SAAS SAAS020620
Cellular component	Cytoplasm SAAS SAAS020620
Domain	Signal EMBL CAE29428.1
Ligand	Metal-binding SAAS SAAS020620 Zinc SAAS SAAS020620
Molecular function	Isomerase SAAS SAAS020620 EMBL CAE29428.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	D-sedoheptulose 7-phosphate isomerase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 35	35	Potential EMBL CAE29428.1
	Chain	36 – 195	160	Potential EMBL CAE29428.1		PRO_5000097716

Sequences

	Sequence		Length	Mass (Da)
	Q6N2R2 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: AE4D8F2DF947D40F	FASTA	195	19,946
	10 20 30 40 50 60 MSQDKIAAHF QLSLAAMTAA AGDATLLAAS RAIAAASIKA LEQGRKILLA GNGGSAADAQ 70 80 90 100 110 120 HIAAEIIGRY KRDRAAWPAV ALTTDTSALT AIANDYGFER VFARQVEGLG QPGDVFIGIT 130 140 150 160 170 180 TSGRSPNILA ALEVARQRGL VTVGMTGPSG GSMGALCDHL LIAPGPETAL VQQIHLMAAH 190 AICDEIEVVL GKPAP

References

[1]

"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris." Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S. Nat. Biotechnol. 22:55-61(2004) [PubMed: 14704707] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX572605 Genomic DNA. Translation: CAE29428.1.
RefSeq	NP_949324.1. NC_005296.1.
3D structure databases
ProteinModelPortal	Q6N2R2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2690193.
GenomeReviews	Gene locus RPA3987 in contig BX571963_GR.
KEGG	rpa:RPA3987.
NMPDR	fig|258594.1.peg.3967.
PATRIC	23292545. VBIRhoPal84835_4188.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG671955.
OMA	IGRYKRD.
ProtClustDB	PRK13937.
Enzyme and pathway databases
BioCyc	RPAL258594:RPA3987-MONOMER.
Family and domain databases
HAMAP	MF_00067. GmhA. [Tree]
InterPro	IPR020620. Phosphoheptose_isomerase. IPR001347. SIS. [Graphical view]
KO	K03271.
Pfam	PF01380. SIS. 1 hit. [Graphical view]
PROSITE	PS51464. SIS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6N2R2_RHOPA

Accession

Primary (citable) accession number: Q6N2R2

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)