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Protein
Submitted name:

Complete genome; segment 13/16

Gene

RPA4000

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Complete genome; segment 13/16Imported
Gene namesi
Ordered Locus Names:RPA4000Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA4000.

Structurei

3D structure databases

ProteinModelPortaliQ6N2P9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000067242.
OMAiRYIGDGI.
OrthoDBiEOG61CKW9.
PhylomeDBiQ6N2P9.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR025874. DZR.
IPR029787. Nucleotide_cyclase.
IPR027417. P-loop_NTPase.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF12773. DZR. 1 hit.
PF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 3 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF55073. SSF55073. 1 hit.
PROSITEiPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6N2P9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRCSACGLSA PTEASFCPRC GAKLSLHCQS CGFRSPLGSH FCGGCGASLV
60 70 80 90 100
EASGTTVTGV SGGIAPDRDQ RPERRQVTIL FVDMIGSTEM SVRLDEEEFK
110 120 130 140 150
DIIYRYRDIC ANAVRQFDGC IVRYIGDGIL VCFGFPFAHE DDPIRAARAG
160 170 180 190 200
LALLDNLQRL NSEQETKAIQ VRMGMHTGIV IAGDLRSSDT FEAMGILGET
210 220 230 240 250
PNIASRVQNL AAPDRLVITL ETAQLLGERF DLIDLGLQQA RGVDGPLHLF
260 270 280 290 300
EVAGERTEAT RERPPASHKM IGRQQELALL QDRFFRAQDG EGQVVQIIAE
310 320 330 340 350
AGAGKTRLVR EFKARLDPAA FLPMTCYCSA YSRSSAFYPI IEMIRRVVKP
360 370 380 390 400
DGDADAEAMS ANLQRSFVGL ETITPEATAL VAELLELPVS PAIKDIPPAR
410 420 430 440 450
RRELLLEVLT QWVLKQSEDV PVILVVEDLH WADASTTTLL RHIVERLSNW
460 470 480 490 500
RVMTIFTFRP ELTAEWLLGS QVTRLGLRRL SKNEARALTA QIAEASTMTA
510 520 530 540 550
DIIASIVAKT GGIPLFIEEL TKAVLAGASS ADHDPARLTA LVDSIPSTLR
560 570 580 590 600
GSLAARLDRL QIAKPLAQVA ATLGRTFDSK VLAAVTGESQ PALRAQLDEL
610 620 630 640 650
LRQGFIHQHG TQVQAKYSFK HALIQEAAYD SLLKSERRSM HRRIAEVIST
660 670 680 690 700
QFADVVAATP EVLAEHYAAA ELAESAIAHW EAAGNKAAER SANVEAASHF
710 720 730 740 750
ANALAVLRRM PDTTERARRE LSLELQRGSQ LLAIKGNAAP QVEEVFTRAY
760 770 780 790 800
QLSWRLGEHR LLFRALYGLM MFFIVRGQLE KAHQCGVRLI EQAERAGDDG
810 820 830 840 850
LQLQAKRPLG LTQFYLGQFS SAKETLKQAL QLYDPDRHHH HRFEYGSDPA
860 870 880 890 900
VLAQCNLAWT EWFVGLPDTA IADSAQAMAR AIQLNHPHSL GFALSFEASI
910 920 930 940 950
RQSRGEPKEA LQAAEQAIQI GQSYRFPYWS AWGRILRGWA IGRLDSPASG
960 970 980 990 1000
AAEIKAGLED YRATGAELIR PYGLMLLAET LGTDGALEDA LALLNEALDI
1010 1020 1030 1040 1050
TETNRTLFCG PELYRLRGSL LLAADSHDDA GGENLRKAVD LAHELGSPML
1060 1070 1080 1090 1100
ELRALASLVS ASPPRGSSAP LQRLERLRDA MTEGFATADL AEVARVIELA

ATHRR
Length:1,105
Mass (Da):121,033
Last modified:July 5, 2004 - v1
Checksum:iA20ACAE2C5C60E6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572605 Genomic DNA. Translation: CAE29441.1.
RefSeqiNP_949337.1. NC_005296.1.
WP_011159536.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE29441; CAE29441; RPA4000.
KEGGirpa:RPA4000.
PATRICi23292571. VBIRhoPal84835_4201.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572605 Genomic DNA. Translation: CAE29441.1.
RefSeqiNP_949337.1. NC_005296.1.
WP_011159536.1. NC_005296.1.

3D structure databases

ProteinModelPortaliQ6N2P9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA4000.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE29441; CAE29441; RPA4000.
KEGGirpa:RPA4000.
PATRICi23292571. VBIRhoPal84835_4201.

Phylogenomic databases

HOGENOMiHOG000067242.
OMAiRYIGDGI.
OrthoDBiEOG61CKW9.
PhylomeDBiQ6N2P9.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR025874. DZR.
IPR029787. Nucleotide_cyclase.
IPR027417. P-loop_NTPase.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF12773. DZR. 1 hit.
PF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 3 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF55073. SSF55073. 1 hit.
PROSITEiPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009Imported.

Entry informationi

Entry nameiQ6N2P9_RHOPA
AccessioniPrimary (citable) accession number: Q6N2P9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.