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Protein
Submitted name:

Complete genome; segment 14/16

Gene

RPA4202

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Complete genome; segment 14/16Imported
Gene namesi
Ordered Locus Names:RPA4202Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727 PotentialImportedAdd
BLAST
Chaini28 – 441414 PotentialImportedPRO_5001382266Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA4202.

Structurei

3D structure databases

ProteinModelPortaliQ6N248.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000148079.
OMAiRATHDIS.
PhylomeDBiQ6N248.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6N248-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNLSSLFKA GLCLAIAGVG SLAAVAGVVF GLPLLLQVGL GASLLGAVGV
60 70 80 90 100
AAMLLRLDRM LTQIDEVCGR IADGDFEARL IGYRDGGRLL QMQNRFNDMI
110 120 130 140 150
DRCDAFVRES SAAMAAIRDD KYYRHILPQG LRGSLLIASR TINEAMQAIE
160 170 180 190 200
TRVAAFNANT SEFETAIGTV IDAVGAASSN MGETATSLNR GVIATRDRTL
210 220 230 240 250
AVSAASEQAS TNMETVAAAT AELTASANEI LGSVNRSASI AQAAVAASDH
260 270 280 290 300
ARDTVGSLST ATERIGAIVQ LIEEIASQTN LLALNATIEA ARAGDAGRGF
310 320 330 340 350
SVVAQEVKSL AEQTANATRD ISRSIAEVQE TTRAAVDAIS GIGRSIGEVD
360 370 380 390 400
DITHQVALAV EAQTAATGEV ARNIEEAFAG IRDISGNIQS VGSNITETEQ
410 420 430 440
HAEVTLSASG TLAQQARSLG DAVRDFLRTL HRDGLESRKA A
Length:441
Mass (Da):45,858
Last modified:July 5, 2004 - v1
Checksum:i4DDE424870DFC700
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572606 Genomic DNA. Translation: CAE29643.1.
RefSeqiNP_949538.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE29643; CAE29643; RPA4202.
KEGGirpa:RPA4202.
PATRICi23292991. VBIRhoPal84835_4409.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572606 Genomic DNA. Translation: CAE29643.1.
RefSeqiNP_949538.1. NC_005296.1.

3D structure databases

ProteinModelPortaliQ6N248.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA4202.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE29643; CAE29643; RPA4202.
KEGGirpa:RPA4202.
PATRICi23292991. VBIRhoPal84835_4409.

Phylogenomic databases

HOGENOMiHOG000148079.
OMAiRATHDIS.
PhylomeDBiQ6N248.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009Imported.

Entry informationi

Entry nameiQ6N248_RHOPA
AccessioniPrimary (citable) accession number: Q6N248
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 29, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.