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Q6N248 (Q6N248_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4202 EMBL CAE29643.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE29643.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE29643.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL CAE29643.1
Chain28 – 441414 Potential
PRO_5000097759

Sequences

Sequence LengthMass (Da)Tools
Q6N248 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 4DDE424870DFC700

FASTA44145,858
        10         20         30         40         50         60 
MTNLSSLFKA GLCLAIAGVG SLAAVAGVVF GLPLLLQVGL GASLLGAVGV AAMLLRLDRM 

        70         80         90        100        110        120 
LTQIDEVCGR IADGDFEARL IGYRDGGRLL QMQNRFNDMI DRCDAFVRES SAAMAAIRDD 

       130        140        150        160        170        180 
KYYRHILPQG LRGSLLIASR TINEAMQAIE TRVAAFNANT SEFETAIGTV IDAVGAASSN 

       190        200        210        220        230        240 
MGETATSLNR GVIATRDRTL AVSAASEQAS TNMETVAAAT AELTASANEI LGSVNRSASI 

       250        260        270        280        290        300 
AQAAVAASDH ARDTVGSLST ATERIGAIVQ LIEEIASQTN LLALNATIEA ARAGDAGRGF 

       310        320        330        340        350        360 
SVVAQEVKSL AEQTANATRD ISRSIAEVQE TTRAAVDAIS GIGRSIGEVD DITHQVALAV 

       370        380        390        400        410        420 
EAQTAATGEV ARNIEEAFAG IRDISGNIQS VGSNITETEQ HAEVTLSASG TLAQQARSLG 

       430        440 
DAVRDFLRTL HRDGLESRKA A 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572606 Genomic DNA. Translation: CAE29643.1.
RefSeqNP_949538.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N248.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4202.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE29643; CAE29643; RPA4202.
GeneID2691709.
KEGGrpa:RPA4202.
PATRIC23292991. VBIRhoPal84835_4409.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
OMARATHDIS.
ProtClustDBCLSK589901.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N248_RHOPA
AccessionPrimary (citable) accession number: Q6N248
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)