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Q6N1U8 (Q6N1U8_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4306 EMBL CAE29747.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE29747.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE29747.1
   Molecular functionReceptor EMBL CAE29747.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL CAE29747.1
Chain32 – 561530 Potential
PRO_5000097781

Sequences

Sequence LengthMass (Da)Tools
Q6N1U8 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: A8408FD97DFC501A

FASTA56158,533
        10         20         30         40         50         60 
MKFTNLRISP KLGILVGVAM LGLVASGLFA ASMLQREMSN ERFEQTKALV ESALNMAIGL 

        70         80         90        100        110        120 
QKQVAAGKLT KEQAIAEFQQ RAQSMTYDGT NGYFFAYKMD GSVVVMSDPK MIGTNRLDVE 

       130        140        150        160        170        180 
TGGRKIVREL RDGVAAKGDV TLIYEFMKPG SSELLRKVSY AAAVPGWDMF VGTGAYLQDI 

       190        200        210        220        230        240 
NAKLKPLLTW LGVVIVGIGV VCALVAWLIS RSITQPLGAL GTRMTSLAEG QLDAPIPGVD 

       250        260        270        280        290        300 
RGDEIGAMAK TVQVFKDNAI RIRGLEQQEQ EAQRRAAAER SALMQSIADD FERSVNGVVR 

       310        320        330        340        350        360 
SVADATRYMQ STAQSMTSTA ADASTRAAAV GAASDSASGM VGTVASASEQ LSSSVQEISR 

       370        380        390        400        410        420 
QVDQSRSVAS KAVSDAEQTN GTVMQLSVSA EKIGEVVQLI HSIASQTNLL ALNATIEAAR 

       430        440        450        460        470        480 
AGESGRGFAV VASEVKALAS QTAKATEEIS AQVAAMQSST ASAVESIGGI TATIGEINKI 

       490        500        510        520        530        540 
TVAIATAVEQ QGAATQEIAR NIQSVAAGSS EISDHIGGVS SAAQATGDAA SEVLSHARAL 

       550        560 
DSQSGALQSA VDDFLRKIRA A 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572606 Genomic DNA. Translation: CAE29747.1.
RefSeqNP_949642.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N1U8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4306.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE29747; CAE29747; RPA4306.
GeneID2690017.
KEGGrpa:RPA4306.
PATRIC23293209. VBIRhoPal84835_4518.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
KOK03406.
OMANIAATIN.
OrthoDBEOG6R2GXB.
PhylomeDBQ6N1U8.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF08269. Cache_2. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N1U8_RHOPA
AccessionPrimary (citable) accession number: Q6N1U8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)