Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q6N1U7 (Q6N1U7_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4307 EMBL CAE29748.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE29748.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE29748.1
   Molecular functionReceptor EMBL CAE29748.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL CAE29748.1
Chain28 – 561534 Potential
PRO_5000097782

Sequences

Sequence LengthMass (Da)Tools
Q6N1U7 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 1D07001A62BB12C8

FASTA56158,967
        10         20         30         40         50         60 
MKFSNLRITP KLGLLVAGTM IGLCVAGILA GVMMQREMLN ARFEQAKAIT EMGRNLAIGL 

        70         80         90        100        110        120 
QKKVEAGELT KEQAVAQFAR DAAMLTYDNG QGYLFAYTMD GVTIATPDKK AIGTNRMNTP 

       130        140        150        160        170        180 
TGDRYLVREL RDGVATKGDV TLYYDFRRPG TEENIRKMSY GLAIPGWDMF VGTGAYLDDV 

       190        200        210        220        230        240 
DAKLKPIFWT LGGAIFAIAI VAGLFAVLIA RGITRPLAKL GARMDSLAHG ELEQPIPGIE 

       250        260        270        280        290        300 
RGDEVGEMAK TVQVFKDNAL RIRDLERAEE AAKEHAEAER RAAMEQLADE FEHSVNGVVQ 

       310        320        330        340        350        360 
SVATATSGMQ QTAQSMTATA TDASARAATV SSASASASNN VSTVASAAEE LSASVTEISR 

       370        380        390        400        410        420 
QVEQSREIAG KAVDDAALTN QTVKLLATGA EKIGEVVQLI HSIASQTNLL ALNATIEAAR 

       430        440        450        460        470        480 
AGESGRGFAV VASEVKALAS QTAKATEEIS AQVAAMQSST NDAVQSIGGI TATIAQMSEI 

       490        500        510        520        530        540 
TMAISTAVEQ QGAATREIAR NIQSVAAGST EISMHIGGVT EAASATGSAA SQVLANAREL 

       550        560 
DAQSGELRRA VDDFLGKVRA A 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572606 Genomic DNA. Translation: CAE29748.1.
RefSeqNP_949643.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N1U7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4307.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE29748; CAE29748; RPA4307.
GeneID2690027.
KEGGrpa:RPA4307.
PATRIC23293211. VBIRhoPal84835_4519.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
KOK03406.
OMAITMAIST.
OrthoDBEOG6KDM1S.
ProtClustDBCLSK820361.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF08269. Cache_2. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N1U7_RHOPA
AccessionPrimary (citable) accession number: Q6N1U7
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)