Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q6N1U3 (Q6N1U3_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4311 EMBL CAE29752.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE29752.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length434 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE29752.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2828 Potential EMBL CAE29752.1
Chain29 – 434406 Potential
PRO_5000097784

Sequences

Sequence LengthMass (Da)Tools
Q6N1U3 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 36401623AA7ECA33

FASTA43444,029
        10         20         30         40         50         60 
MMSLSSLSKA MLAVAVAAVV MLGLAVARIL IGPLGSVVEI AGLLLGLGSI GVAAWLLRGA 

        70         80         90        100        110        120 
AGAVGEIAAV AESAAHGDLE ARVQGRRDGG DIGKAQAGVN NMLDIVDAFV REASASMDYV 

       130        140        150        160        170        180 
SQGKTFRKVL TRGLPGSFKV ASTTINNATG VMDRRVRDVA KEAQCFAAGM DNVASMLVTA 

       190        200        210        220        230        240 
STGLKGDAGA MANAAEETSR QSVSVASGAE QASANVQTVA SAAEELTASI AEISRQIQHS 

       250        260        270        280        290        300 
TASTHQAVDE AAQTTAKIQQ LADAAQRIGD VVKLINAVAA QTNLLALNAT IEAARAGESG 

       310        320        330        340        350        360 
RGFAVVAAEV KALASQTAKA TEEITARIGE MQSITEQSVG AVEAISRRIS EINEVSTTIA 

       370        380        390        400        410        420 
SAVEEQGAAT REIASNVQQA SAGTALVSSN VVGISHAADD AGKIAVRVNG VSGEIAGQVD 

       430 
RLRSEVQRFI SQVA 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572606 Genomic DNA. Translation: CAE29752.1.
RefSeqNP_949647.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N1U3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4311.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE29752; CAE29752; RPA4311.
GeneID2689837.
KEGGrpa:RPA4311.
PATRIC23293219. VBIRhoPal84835_4523.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
OMAEDISHRM.
OrthoDBEOG6FRCT1.
PhylomeDBQ6N1U3.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N1U3_RHOPA
AccessionPrimary (citable) accession number: Q6N1U3
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)