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Q6N1F7 (Q6N1F7_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4449 EMBL CAE29890.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE29890.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length563 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionReceptor EMBL CAE29890.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6N1F7 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: C90DFF5D149F5FF9

FASTA56360,404
        10         20         30         40         50         60 
MLSRLHLTIG RRIYLLIGLG FVGLIGLTLL DSRELATGLQ QQKQIELKHL AELAISFVKD 

        70         80         90        100        110        120 
EYDAAQRGEI STDQAQKRAE ARIAKLRYGG NEYFFITDMQ SKMLMHPIAK QLVGQDQSNA 

       130        140        150        160        170        180 
KDPNGKMLFV EMVNTVRRSG SGFVDYVWPK PGSDKPQPKL TFVAGFEPWG WVIGTGVYID 

       190        200        210        220        230        240 
DLDAQTWSAM QRSLIAATLV LLITIAVSVF MARRITRPIL AMTGAMKDLA GGRIDIEVPG 

       250        260        270        280        290        300 
IGRHDEIGEM AEAVEVFKLN AQERRRLEGE RQEIEARAEA ERRAHANQVA EAFERAIGEI 

       310        320        330        340        350        360 
VETVSAASDE LEASATTLTR TAEQSQELAT AVAAASEEAS TNVQSVASAT EEMSSSVNEI 

       370        380        390        400        410        420 
SRQVQESARI AHEAVDQARQ TNGRVEELAK AASRIGDVVE LISNIAGQTN LLALNATIEA 

       430        440        450        460        470        480 
ARAGEAGRGF AVVASEVKAL AEQTAKATGE ITLQINGIQA ATDQSVAAIK EIGETIAKMS 

       490        500        510        520        530        540 
EISSTIASAV EEQGAATQEI SRNVQQASLG TQQVSSNITD VQRGATETGA ASAQVLAAAK 

       550        560 
SLSGDSNRLK VEVSNFLDSV RAA 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572607 Genomic DNA. Translation: CAE29890.1.
RefSeqNP_949785.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N1F7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4449.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE29890; CAE29890; RPA4449.
GeneID2692462.
KEGGrpa:RPA4449.
PATRIC23293533. VBIRhoPal84835_4675.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
KOK03406.
OMAKEVQNAS.
OrthoDBEOG6C8MTF.
ProtClustDBCLSK827534.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF08269. Cache_2. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM01049. Cache_2. 1 hit.
SM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N1F7_RHOPA
AccessionPrimary (citable) accession number: Q6N1F7
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)