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Q6N1C5 (Q6N1C5_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4481 EMBL CAE29922.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE29922.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE29922.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL CAE29922.1
Chain28 – 440413 Potential EMBL CAE29922.1
PRO_5000097834

Sequences

Sequence LengthMass (Da)Tools
Q6N1C5 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 0537BF7CC4B7AE03

FASTA44046,174
        10         20         30         40         50         60 
MTNLCSLSKA QLNLAVIIVA SSIALALEAL DYRPAAMTIQ GFAILASCLA LYRMVQTTRL 

        70         80         90        100        110        120 
ISQARDVCLR IAAGDFEARI LRIPDNGRTG DMLRAVNDVI DGCDAFVREA TAAMDAVQHR 

       130        140        150        160        170        180 
RYFRRILPGG LHGALLRGAE TINAATDSIE QRINTFAQQA EQLESAVTGV VSSLDEDSRG 

       190        200        210        220        230        240 
MRDTAGSLTS GASLTRERLT TVAASAEHAS SNMRSVAAAT TELSASAREV GAEIGRSAEV 

       250        260        270        280        290        300 
VGRAVSRVSE AAANVASLRS VAERIAEVVK SIEVIAGQTN LLALNATIEA ARAGEAGRGF 

       310        320        330        340        350        360 
AVVAAEVKAL AEQTAKFTGE IEAQVEHVHS AADLVSRSIG EIGAVMTEVD DITAAVAGAA 

       370        380        390        400        410        420 
EAQSAATADI AKNIEQAYDV VSEITGSIQT VTESARDTEQ YAASTMTAST HLSSQSETLA 

       430        440 
HRIRDYLARV RADMLAQRAA 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572607 Genomic DNA. Translation: CAE29922.1.
RefSeqNP_949817.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N1C5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4481.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE29922; CAE29922; RPA4481.
GeneID2691917.
KEGGrpa:RPA4481.
PATRIC23293599. VBIRhoPal84835_4708.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
OMATESARDT.
OrthoDBEOG6G20HP.
PhylomeDBQ6N1C5.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 2 hits.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N1C5_RHOPA
AccessionPrimary (citable) accession number: Q6N1C5
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)