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Protein
Submitted name:

Complete genome; segment 15/16

Gene

RPA4481

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Complete genome; segment 15/16Imported
Gene namesi
Ordered Locus Names:RPA4481Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727 PotentialImportedAdd
BLAST
Chaini28 – 440413 PotentialImportedPRO_5000097834Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA4481.

Structurei

3D structure databases

ProteinModelPortaliQ6N1C5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000148079.
OMAiRINTFAQ.
OrthoDBiEOG6G20HP.
PhylomeDBiQ6N1C5.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 2 hits.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6N1C5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNLCSLSKA QLNLAVIIVA SSIALALEAL DYRPAAMTIQ GFAILASCLA
60 70 80 90 100
LYRMVQTTRL ISQARDVCLR IAAGDFEARI LRIPDNGRTG DMLRAVNDVI
110 120 130 140 150
DGCDAFVREA TAAMDAVQHR RYFRRILPGG LHGALLRGAE TINAATDSIE
160 170 180 190 200
QRINTFAQQA EQLESAVTGV VSSLDEDSRG MRDTAGSLTS GASLTRERLT
210 220 230 240 250
TVAASAEHAS SNMRSVAAAT TELSASAREV GAEIGRSAEV VGRAVSRVSE
260 270 280 290 300
AAANVASLRS VAERIAEVVK SIEVIAGQTN LLALNATIEA ARAGEAGRGF
310 320 330 340 350
AVVAAEVKAL AEQTAKFTGE IEAQVEHVHS AADLVSRSIG EIGAVMTEVD
360 370 380 390 400
DITAAVAGAA EAQSAATADI AKNIEQAYDV VSEITGSIQT VTESARDTEQ
410 420 430 440
YAASTMTAST HLSSQSETLA HRIRDYLARV RADMLAQRAA
Length:440
Mass (Da):46,174
Last modified:July 5, 2004 - v1
Checksum:i0537BF7CC4B7AE03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572607 Genomic DNA. Translation: CAE29922.1.
RefSeqiNP_949817.1. NC_005296.1.
WP_011160015.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE29922; CAE29922; RPA4481.
KEGGirpa:RPA4481.
PATRICi23293599. VBIRhoPal84835_4708.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX572607 Genomic DNA. Translation: CAE29922.1.
RefSeqiNP_949817.1. NC_005296.1.
WP_011160015.1. NC_005296.1.

3D structure databases

ProteinModelPortaliQ6N1C5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA4481.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE29922; CAE29922; RPA4481.
KEGGirpa:RPA4481.
PATRICi23293599. VBIRhoPal84835_4708.

Phylogenomic databases

HOGENOMiHOG000148079.
OMAiRINTFAQ.
OrthoDBiEOG6G20HP.
PhylomeDBiQ6N1C5.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 2 hits.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009Imported.

Entry informationi

Entry nameiQ6N1C5_RHOPA
AccessioniPrimary (citable) accession number: Q6N1C5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 27, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.