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Q6N0X1 (Q6N0X1_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4639 EMBL CAE30079.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE30079.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE30079.1
   Molecular functionReceptor EMBL CAE30079.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3030 Potential EMBL CAE30079.1
Chain31 – 564534 Potential EMBL CAE30079.1
PRO_5000097864

Sequences

Sequence LengthMass (Da)Tools
Q6N0X1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 51E06A31C8D86CBF

FASTA56459,591
        10         20         30         40         50         60 
MLAKLSIRIK IVTLVALLLV ALSGLGALSV LKLSSMNTNT VEITTNWLPT VTVLGEMRAE 

        70         80         90        100        110        120 
VLSYRMKLRD HLLETNDDKM AAIEKQIDAI SGKIKDSQKR YEALISSPEE RQIYQKWVEA 

       130        140        150        160        170        180 
WGKYRALVPK LIDLSRKATN GQISVEGASL LSNTLTPLAD QMDVELQKDI DLNNKGADDA 

       190        200        210        220        230        240 
SSAAAATYSS AFLIVVAILA LTIVGGIFAS ILVIRDITLA IASIISPMQE LGKGNLAADV 

       250        260        270        280        290        300 
PHRGESTEIG RMADALQVFK EALVAKRDAD AAAAKEAEEK IARAQRVDSA TRQFEHAIGE 

       310        320        330        340        350        360 
IVDTVSSAST ELEASASTLT STAERAQELA TSVAAASEEA STNVQSVASA TEEMTSSITE 

       370        380        390        400        410        420 
ISRQVQESAR IANDAVDQAR RTNESVSDLS HAAARIGDVV ELINTIAGQT NLLALNATIE 

       430        440        450        460        470        480 
AARAGEAGRG FAVVAAEVKA LAEQTAKATG EISQHITGIQ TATGQSVDAI KEIGQTIGRM 

       490        500        510        520        530        540 
SEIASTIASA VEEQGAATQE ISRNVQQAAH GTQQVSSNIT DVQRGATETG SASSQVLSAA 

       550        560 
QSLSQDSNRL KVEVTKFLET VRAA 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572607 Genomic DNA. Translation: CAE30079.1.
RefSeqNP_949973.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N0X1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4639.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE30079; CAE30079; RPA4639.
GeneID2691200.
KEGGrpa:RPA4639.
PATRIC23293929. VBIRhoPal84835_4871.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
KOK03406.
OMAWICIGIT.
OrthoDBEOG6TR09S.
ProtClustDBCLSK818821.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N0X1_RHOPA
AccessionPrimary (citable) accession number: Q6N0X1
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)