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Q6N0S7 (Q6N0S7_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPA4684 EMBL CAE30124.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE30124.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length559 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAE30124.1
   Molecular functionReceptor EMBL CAE30124.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL CAE30124.1
Chain27 – 559533 Potential
PRO_5000097872

Sequences

Sequence LengthMass (Da)Tools
Q6N0S7 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 0BDAE3DAFBE15D1F

FASTA55959,105
        10         20         30         40         50         60 
MRLSITRAVL LFGLIIGSGL TAIFGASLYG LSQLKVGGPL YEQIKLGNDL VADILPPPAY 

        70         80         90        100        110        120 
VIEAYLEATL ALEDPGSLAL HRERLGRLKK EYQERHAFWS KAPLEPAIKA RLIDDSDREV 

       130        140        150        160        170        180 
QKFWRIVDAS LLPAIEAKDP DTSMQAYKDL TAAYTAHRAI IDDIVKRTND LNAATEAATA 

       190        200        210        220        230        240 
VRVTDLNYLL WGVSGTVFLL FVAGLTAIVK GVIVPITGMT EVMRRLASGD RAVAIPAIER 

       250        260        270        280        290        300 
GDEVGAMARA VQVFKDNALR VEAMESEQGI KARADADRRT EMHKMADDLD RAIGRIVQTV 

       310        320        330        340        350        360 
TSTSTEMEAA ARQLEGAAET TQRLVTTVAA ASQQSTATAQ SASASCNEVA SSASQIGQQV 

       370        380        390        400        410        420 
RQSQNISQAA VRQAQETNAR IAELSKAAGR IGDVVDLINA VASQTNLLAL NATIEAARAG 

       430        440        450        460        470        480 
EAGRGFAVVA AEVKALAAQT ARATDEITEQ ISQMKAATES SVSAIEAIGN TILQISEISD 

       490        500        510        520        530        540 
STASAVDHQG AAMREIASTV RQSADAATEV SGTIGAVRDG AQNTGAASTH VHDLAAALLA 

       550 
ESRHLKTEVD RFSAAVRAA 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572608 Genomic DNA. Translation: CAE30124.1.
RefSeqNP_950018.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6N0S7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA4684.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE30124; CAE30124; RPA4684.
GeneID2689777.
KEGGrpa:RPA4684.
PATRIC23294043. VBIRhoPal84835_4922.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
OMARTNDLNA.
OrthoDBEOG644ZKX.
ProtClustDBCLSK460517.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6N0S7_RHOPA
AccessionPrimary (citable) accession number: Q6N0S7
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)