4-oxalomesaconate hydratase - Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)

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Q6N0R4 (Q6N0R4_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. History...

Clusters with 100%, 90%, 50% identity |

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
4-oxalomesaconate hydratase EMBL CAE30137.1

Gene names

Name:	ligJ EMBL CAE30137.1
Ordered Locus Names:	RPA4697

Organism

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	342 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Metal-binding PDB 2GWG Zinc PDB 2GWG
Technical term	3D-structure PDB 2GWG Complete proteome
Gene Ontology (GO)
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

1

Zinc; via tele nitrogen PDB 2GWG

Metal binding

1

Zinc; via tele nitrogen PDB 2GWG

Metal binding

1

Zinc; via tele nitrogen PDB 2GWG

Metal binding

1

Sequences

Sequence

Length

Mass (Da)

Tools

Q6N0R4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 8C1E4CB3BC6E81F8
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342

38,469

        10         20         30         40         50         60 
MIIDIHGHYT TAPKALEDWR NRQIAGIKDP SVMPKVSELK ISDDELQASI IENQLKKMQE 

        70         80         90        100        110        120 
RGSDLTVFSP RASFMAHHIG DFNVSSTWAA ICNELCYRVS QLFPDNFIGA AMLPQSPGVD 

       130        140        150        160        170        180 
PKTCIPELEK CVKEYGFVAI NLNPDPSGGH WTSPPLTDRI WYPIYEKMVE LEIPAMIHVS 

       190        200        210        220        230        240 
TSCNTCFHTT GAHYLNADTT AFMQCVAGDL FKDFPELKFV IPHGGGAVPY HWGRFRGLAQ 

       250        260        270        280        290        300 
EMKKPLLEDH VLNNIFFDTC VYHQPGIDLL NTVIPVDNVL FASEMIGAVR GIDPRTGFYY 

       310        320        330        340 
DDTKRYIEAS TILTPEEKQQ IYEGNARRVY PRLDAALKAK GK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris." Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S. Nat. Biotechnol. 22:55-61(2004) [PubMed: 14704707] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-98 / CGA009.
[2]	"Crystal Structure of 4-Oxalomesaconate Hydratase, LigJ, from Rhodopseudomonas palustris, Northeast Structural Genomics Target RpR66." Northeast Structural Genomics Consortium (NESG) Forouhar F., Abashidze M., Jayaraman S., Cunningham K., Ciao M., Ma L., Xiao R., Acton T.B., Montelione G.T., Hunt J.F., Tong L. Submitted (MAY-2006) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BX572608 Genomic DNA. Translation: CAE30137.1.

RefSeq

NP_950031.1. NC_005296.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2GWG	X-ray	1.80	A/B	1-342	[»]

ProteinModelPortal

SMR

Q6N0R4. Positions 1-342.

ModBase

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

GeneID

GenomeReviews

Gene locus RPA4697 in contig BX571963_GR.

KEGG

NMPDR

fig|258594.1.peg.4674.

PATRIC

23294067. VBIRhoPal84835_4934.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

OMA

ProtClustDB

Enzyme and pathway databases

BioCyc

RPAL258594:RPA4697-MONOMER.

Family and domain databases

InterPro

IPR006992. Amidohydro_2.
[Graphical view]

KO

Pfam

PF04909. Amidohydro_2. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

Q6N0R4_RHOPA

Accession

Primary (citable) accession number: Q6N0R4

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info