Q6N022 (TEN4_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 70.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Teneurin-4 Short name=Ten-4 Alternative name(s): Protein Odd Oz/ten-m homolog 4 Tenascin-M4 Short name=Ten-m4 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 2769 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | May function as a cellular signal transducer. |
| Subunit structure | Homodimer; disulfide-linked Probable. |
| Subcellular location | Membrane; Single-pass type II membrane protein Probable. |
| Domain | EGF-like domains 2 and 5 which have an odd number of cysteines might enable the formation of intermolecular disulfide bonds. Cytoplasmic proline-rich regions could serve as docking domains for intracellular SH3-containing proteins. |
| Sequence similarities | Belongs to the tenascin family. Teneurin subfamily. Contains 8 EGF-like domains. Contains 5 NHL repeats. Contains 1 teneurin N-terminal domain. Contains 23 YD repeats. |
| Sequence caution | The sequence BAB71206.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Membrane |
| Coding sequence diversity | Polymorphism |
| Domain | EGF-like domain Repeat Signal-anchor Transmembrane Transmembrane helix |
| PTM | Disulfide bond Glycoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | signal transduction Inferred from electronic annotation. Source: InterPro |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2769 | 2769 | Teneurin-4 | PRO_0000259508 | |||||||
Regions | |||||||||||
| Topological domain | 1 – 345 | 345 | Cytoplasmic Potential | ||||||||
| Transmembrane | 346 – 366 | 21 | Helical; Potential | ||||||||
| Topological domain | 367 – 2769 | 2403 | Extracellular Potential | ||||||||
| Domain | 1 – 341 | 341 | Teneurin N-terminal | ||||||||
| Domain | 562 – 593 | 32 | EGF-like 1 | ||||||||
| Domain | 594 – 624 | 31 | EGF-like 2 | ||||||||
| Domain | 626 – 658 | 33 | EGF-like 3 | ||||||||
| Domain | 659 – 690 | 32 | EGF-like 4 | ||||||||
| Domain | 692 – 725 | 34 | EGF-like 5 | ||||||||
| Domain | 726 – 757 | 32 | EGF-like 6 | ||||||||
| Domain | 758 – 787 | 30 | EGF-like 7 | ||||||||
| Domain | 788 – 831 | 44 | EGF-like 8 | ||||||||
| Repeat | 1216 – 1259 | 44 | NHL 1 | ||||||||
| Repeat | 1264 – 1308 | 45 | NHL 2 | ||||||||
| Repeat | 1334 – 1378 | 45 | NHL 3 | ||||||||
| Repeat | 1393 – 1444 | 52 | NHL 4 | ||||||||
| Repeat | 1523 – 1566 | 44 | NHL 5 | ||||||||
| Repeat | 1576 – 1595 | 20 | YD 1 | ||||||||
| Repeat | 1612 – 1632 | 21 | YD 2 | ||||||||
| Repeat | 1675 – 1694 | 20 | YD 3 | ||||||||
| Repeat | 1695 – 1717 | 23 | YD 4 | ||||||||
| Repeat | 1887 – 1906 | 20 | YD 5 | ||||||||
| Repeat | 1928 – 1946 | 19 | YD 6 | ||||||||
| Repeat | 1947 – 1967 | 21 | YD 7 | ||||||||
| Repeat | 1974 – 1991 | 18 | YD 8 | ||||||||
| Repeat | 1992 – 2013 | 22 | YD 9 | ||||||||
| Repeat | 2014 – 2031 | 18 | YD 10 | ||||||||
| Repeat | 2034 – 2054 | 21 | YD 11 | ||||||||
| Repeat | 2057 – 2077 | 21 | YD 12 | ||||||||
| Repeat | 2085 – 2104 | 20 | YD 13 | ||||||||
| Repeat | 2110 – 2127 | 18 | YD 14 | ||||||||
| Repeat | 2128 – 2154 | 27 | YD 15 | ||||||||
| Repeat | 2156 – 2169 | 14 | YD 16 | ||||||||
| Repeat | 2170 – 2193 | 24 | YD 17 | ||||||||
| Repeat | 2196 – 2216 | 21 | YD 18 | ||||||||
| Repeat | 2217 – 2237 | 21 | YD 19 | ||||||||
| Repeat | 2239 – 2259 | 21 | YD 20 | ||||||||
| Repeat | 2271 – 2291 | 21 | YD 21 | ||||||||
| Repeat | 2293 – 2313 | 21 | YD 22 | ||||||||
| Repeat | 2339 – 2380 | 42 | YD 23 | ||||||||
| Compositional bias | 179 – 182 | 4 | Poly-Pro | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 467 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 940 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1259 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1609 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1705 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1741 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1799 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1884 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1985 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2188 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2328 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2646 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 566 ↔ 576 | By similarity | |||||||||
| Disulfide bond | 570 ↔ 581 | By similarity | |||||||||
| Disulfide bond | 583 ↔ 592 | By similarity | |||||||||
| Disulfide bond | 601 ↔ 612 | By similarity | |||||||||
| Disulfide bond | 614 ↔ 623 | By similarity | |||||||||
| Disulfide bond | 630 ↔ 641 | By similarity | |||||||||
| Disulfide bond | 635 ↔ 646 | By similarity | |||||||||
| Disulfide bond | 648 ↔ 657 | By similarity | |||||||||
| Disulfide bond | 662 ↔ 673 | By similarity | |||||||||
| Disulfide bond | 667 ↔ 678 | By similarity | |||||||||
| Disulfide bond | 680 ↔ 689 | By similarity | |||||||||
| Disulfide bond | 700 ↔ 713 | By similarity | |||||||||
| Disulfide bond | 715 ↔ 724 | By similarity | |||||||||
| Disulfide bond | 729 ↔ 739 | By similarity | |||||||||
| Disulfide bond | 733 ↔ 744 | By similarity | |||||||||
| Disulfide bond | 746 ↔ 755 | By similarity | |||||||||
| Disulfide bond | 760 ↔ 770 | By similarity | |||||||||
| Disulfide bond | 764 ↔ 775 | By similarity | |||||||||
| Disulfide bond | 777 ↔ 786 | By similarity | |||||||||
| Disulfide bond | 800 ↔ 810 | By similarity | |||||||||
| Disulfide bond | 804 ↔ 819 | By similarity | |||||||||
| Disulfide bond | 821 ↔ 830 | By similarity | |||||||||
Natural variations | |||||||||||
| Natural variant | 14 | 1 | R → Q. Corresponds to variant rs58537389 [ dbSNP | Ensembl ]. | VAR_062167 | |||||||
| Natural variant | 396 | 1 | V → I. Corresponds to variant rs3812723 [ dbSNP | Ensembl ]. | VAR_060130 | |||||||
| Natural variant | 506 | 1 | E → Q. Corresponds to variant rs17137261 [ dbSNP | Ensembl ]. | VAR_060131 | |||||||
Experimental info | |||||||||||
| Sequence conflict | 1471 | 1 | T → I in CAE45850. Ref.4 | ||||||||
| Sequence conflict | 1842 | 1 | D → G in CAD97943. Ref.4 | ||||||||
| Sequence conflict | 2024 | 1 | L → F in CAD97943. Ref.4 | ||||||||
| Sequence conflict | 2393 | 1 | N → D in CAE45850. Ref.4 | ||||||||
| Sequence conflict | 2551 | 1 | Q → L in BAB71206. Ref.5 | ||||||||
| Sequence conflict | 2586 | 1 | V → G in CAB45719. Ref.4 | ||||||||
| Sequence conflict | 2599 | 1 | N → D in CAB45719. Ref.4 | ||||||||
| Sequence conflict | 2657 | 1 | N → S in BAB71206. Ref.5 | ||||||||
Sequences
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References
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AP002515 Genomic DNA. No translation available. AP002768 Genomic DNA. No translation available. AP002958 Genomic DNA. No translation available. AP002957 Genomic DNA. No translation available. AB037723 mRNA. Translation: BAA92540.3. BX640737 mRNA. Translation: CAE45850.1. AL080120 mRNA. Translation: CAB45719.1. BX537983 mRNA. Translation: CAD97943.1. AK056531 mRNA. Translation: BAB71206.1. Different initiation. |
| IPI | IPI00737429. |
| PIR | T12457. |
| RefSeq | NP_001092286.2. NM_001098816.2. |
| UniGene | Hs.213087. |
3D structure databases | |
| ProteinModelPortal | Q6N022. |
| SMR | Q6N022. Positions 565-857, 1229-1261, 1279-1305, 1350-1376, 1406-1436, 1467-1502, 1537-1563. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q6N022. |
PTM databases | |
| PhosphoSite | Q6N022. |
Polymorphism databases | |
| DMDM | 117949795. |
Proteomic databases | |
| PRIDE | Q6N022. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000278550; ENSP00000278550; ENSG00000149256. |
| GeneID | 26011. |
| KEGG | hsa:26011. |
| UCSC | uc001ozl.2. human. |
Organism-specific databases | |
| CTD | 26011. |
| GeneCards | GC11M078364. |
| H-InvDB | HIX0009980. |
| HGNC | HGNC:29945. ODZ4. |
| MIM | 610084. gene. |
| neXtProt | NX_Q6N022. |
| PharmGKB | PA134896466. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG19791. |
| GeneTree | ENSGT00580000081247. |
| HOGENOM | HBG444169. |
| HOVERGEN | HBG080306. |
| InParanoid | Q6N022. |
| OMA | GYEIDAS. |
| OrthoDB | EOG4MW854. |
| PhylomeDB | Q6N022. |
Gene expression databases | |
| ArrayExpress | Q6N022. |
| Bgee | Q6N022. |
| CleanEx | HS_ODZ4. |
| Genevestigator | Q6N022. |
| GermOnline | ENSG00000149256. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011042. 6-blade_b-propeller_TolB-like. IPR008969. CarboxyPept-like_regulatory. IPR006210. EGF-like. IPR013032. EGF-like_reg_CS. IPR000742. EGF_3. IPR013111. EGF_extracell. IPR022385. Rhs_assc_core. IPR009471. Ten_N. IPR006530. YD. [Graphical view] |
| Gene3D | G3DSA:2.120.10.30. 6-blade_b-propeller_TolB-like. 2 hits. |
| Pfam | PF07974. EGF_2. 3 hits. PF05593. RHS_repeat. 1 hit. PF06484. Ten_N. 2 hits. [Graphical view] |
| SMART | SM00181. EGF. 7 hits. [Graphical view] |
| SUPFAM | SSF49464. CarboxypepD_reg. 1 hit. |
| TIGRFAMs | TIGR03696. Rhs_assc_core. 1 hit. TIGR01643. YD_repeat_2x. 2 hits. |
| PROSITE | PS00022. EGF_1. 8 hits. PS01186. EGF_2. 7 hits. PS50026. EGF_3. 5 hits. PS51125. NHL. False negative. PS51361. TENEURIN_N. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 47758. |
| SOURCE | Search... |
Entry information
| Entry name | TEN4_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6N022 Secondary accession number(s): A6ND26 Q9Y4S2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 11 Human chromosome 11: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with