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Protein
Submitted name:

Putative uncharacterized protein DKFZp686A13234

Gene

DKFZp686A13234

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein DKFZp686A13234Imported
Gene namesi
Name:DKFZp686A13234Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162391459.

PTM / Processingi

Proteomic databases

PaxDbiQ6MZS5.
PRIDEiQ6MZS5.

Expressioni

Gene expression databases

GenevisibleiQ6MZS5. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000363745.

Structurei

3D structure databases

ProteinModelPortaliQ6MZS5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini142 – 22180RRM (RNA recognition motif)InterPro annotationAdd
BLAST
Domaini223 – 30886RRM (RNA recognition motif)InterPro annotationAdd
BLAST
Domaini321 – 39171RRM (RNA recognition motif)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0117. Eukaryota.
ENOG410XTJ5. LUCA.
HOGENOMiHOG000186082.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR006535. HnRNP_R/Q_splicing_fac.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 3 hits.
[Graphical view]
SMARTiSM00360. RRM. 3 hits.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 3 hits.
TIGRFAMsiTIGR01648. hnRNP-R-Q. 1 hit.
PROSITEiPS50102. RRM. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6MZS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GVARAPFLVV FKAPRADSHG PGCRPPLCPG LVAYVDLDER AIDALREFNE
60 70 80 90 100
EGALSVLQQF KESDLSHVQN KSAFLCGVMK TYRQREKQGS KVQESTKGPD
110 120 130 140 150
EAKIKALLER TGYTLDVTTG QRKYGGPPPD SVYSGVQPGI GTEVFVGKIP
160 170 180 190 200
RDLYEDELVP LFEKAGPIWD LRLMMDPLSG QNRGYAFITF CGKEAAQEAV
210 220 230 240 250
KLCDSYEIRP GKHLGVCISV ANNRLFVGSI PKNKTKENIL EEFSKVTGLT
260 270 280 290 300
EGLVDVILYH QPDDKKKNRG FCFLEYEDHK SAAQARRRLM SGKVKVWGNV
310 320 330 340 350
VTVEWADPVE EPDPEVMAKV KVLFVRNLAT TVTEEILEKS FSEFGKLERV
360 370 380 390 400
KKLKDYAFVH FEDRGAAVKA MDEMNGKEIE GEEIEIVLAK PPDKKRKERQ
410 420 430 440 450
AARQASRSTA YEDYYYHPPP RMPPPIRGRG RGGGRGGYGY PPDYYGYEDY
460 470 480 490 500
YDDYYGYDYH DYRGGYEDPY YGYDDGYAVR GRGGGRGGRG APPPPRGRGA
510 520 530 540 550
PPPRGRAGYS QRGAPLGPPR GSRGGRGGPA QQQRGRGSRG SRGNRGGNVG
560 570 580 590 600
GKRKADGYNQ PDSKRRQTNN QQNWGSQPIA QQPLQQGGDY SGNYGYNNDN
610
QEFYQDTYGQ QWK
Length:613
Mass (Da):68,359
Last modified:July 5, 2004 - v1
Checksum:i61288E165FF9930F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640912 mRNA. Translation: CAE45953.1.
RefSeqiNP_001095869.1. NM_001102399.2.
UniGeneiHs.373763.

Genome annotation databases

GeneIDi10236.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640912 mRNA. Translation: CAE45953.1.
RefSeqiNP_001095869.1. NM_001102399.2.
UniGeneiHs.373763.

3D structure databases

ProteinModelPortaliQ6MZS5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000363745.

Proteomic databases

PaxDbiQ6MZS5.
PRIDEiQ6MZS5.

Protocols and materials databases

DNASUi10236.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10236.

Organism-specific databases

CTDi10236.
PharmGKBiPA162391459.

Phylogenomic databases

eggNOGiKOG0117. Eukaryota.
ENOG410XTJ5. LUCA.
HOGENOMiHOG000186082.

Miscellaneous databases

GenomeRNAii10236.

Gene expression databases

GenevisibleiQ6MZS5. HS.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR006535. HnRNP_R/Q_splicing_fac.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 3 hits.
[Graphical view]
SMARTiSM00360. RRM. 3 hits.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 3 hits.
TIGRFAMsiTIGR01648. hnRNP-R-Q. 1 hit.
PROSITEiPS50102. RRM. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Human small intestineImported.

Entry informationi

Entry nameiQ6MZS5_HUMAN
AccessioniPrimary (citable) accession number: Q6MZS5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 8, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.