Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative agmatine deiminase

Gene

aguA

Organism
Mycoplasma mycoides subsp. mycoides SC (strain PG1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Agmatine + H2O = N-carbamoylputrescine + NH3.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei355 – 3551Amidino-cysteine intermediateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciMMYC272632:GI1G-688-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative agmatine deiminaseUniRule annotation (EC:3.5.3.12UniRule annotation)
Alternative name(s):
Agmatine iminohydrolaseUniRule annotation
Gene namesi
Name:aguAUniRule annotation
Ordered Locus Names:MSC_0701
OrganismiMycoplasma mycoides subsp. mycoides SC (strain PG1)
Taxonomic identifieri272632 [NCBI]
Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma
Proteomesi
  • UP000001016 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 364364Putative agmatine deiminasePRO_0000194335Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272632.MSC_0701.

Structurei

3D structure databases

ProteinModelPortaliQ6MSR8.
SMRiQ6MSR8. Positions 6-362.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the agmatine deiminase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DWY. Bacteria.
COG2957. LUCA.
HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6MSR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKKMNSTPK KDGFWMPGEW EKHDQCWMIW PERSDNWRLG AKPAQRVFVN
60 70 80 90 100
VANAIAKYEK VTMLVSHQQF ENARNLLDQN VRVIEMSNDD SWMRDVGPTI
110 120 130 140 150
VKNKDGEIRG VDWVFNAWEG FKGGLYFPWD KDDAIARKVC EICNIDYYRT
160 170 180 190 200
DFVLEGGSIH TDGDGTLYTT EECLLNENRN PDLTKEQIEE NLKEYCGVEK
210 220 230 240 250
VIWLPLGVYN DETNGHVDNL LNVVSPGHVV LTWTDDTTDP QYERSKLAYD
260 270 280 290 300
ILTNTLDAKG RKIKVTKLHQ PGPLFITKEE AEGIDVCDTM SREPEQRMPA
310 320 330 340 350
SYANYYIANN AIILPIFGDK YDDLAVKTLQ SVYPNHKIET VMAREILLGG
360
GNIHCITQQQ PTTK
Length:364
Mass (Da):41,717
Last modified:July 5, 2004 - v1
Checksum:iE825591584C36D96
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX293980 Genomic DNA. Translation: CAE77320.1.
RefSeqiNP_975678.1. NC_005364.2.
WP_011166871.1. NC_005364.2.

Genome annotation databases

EnsemblBacteriaiCAE77320; CAE77320; MSC_0701.
GeneIDi2744292.
KEGGimmy:MSC_0701.
PATRICi20018231. VBIMycMyc4973_0754.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX293980 Genomic DNA. Translation: CAE77320.1.
RefSeqiNP_975678.1. NC_005364.2.
WP_011166871.1. NC_005364.2.

3D structure databases

ProteinModelPortaliQ6MSR8.
SMRiQ6MSR8. Positions 6-362.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272632.MSC_0701.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE77320; CAE77320; MSC_0701.
GeneIDi2744292.
KEGGimmy:MSC_0701.
PATRICi20018231. VBIMycMyc4973_0754.

Phylogenomic databases

eggNOGiENOG4105DWY. Bacteria.
COG2957. LUCA.
HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.

Enzyme and pathway databases

BioCyciMMYC272632:GI1G-688-MONOMER.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Mycoplasma mycoides subsp. mycoides SC type strain PG1T, the causative agent of contagious bovine pleuropneumonia (CBPP)."
    Westberg J., Persson A., Holmberg A., Goesmann A., Lundeberg J., Johansson K.-E., Pettersson B., Uhlen M.
    Genome Res. 14:221-227(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PG1.

Entry informationi

Entry nameiAGUA_MYCMS
AccessioniPrimary (citable) accession number: Q6MSR8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: July 5, 2004
Last modified: November 11, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.