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Q6MR06

- Q6MR06_BDEBA

UniProt

Q6MR06 - Q6MR06_BDEBA

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Protein
Superoxide dismutase [Cu-Zn]
Gene
sodC, Bd0295
Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit By similarity.UniRule annotation
Binds 1 zinc ion per subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
Ordered Locus Names:Bd0295Imported
OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Taxonomic identifieri264462 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
ProteomesiUP000008080: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1414 PredictedImported
Add
BLAST
Chaini15 – 189175 PredictedImported
PRO_5000097946Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi264462.Bd0295.

Structurei

3D structure databases

ProteinModelPortaliQ6MR06.

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000263447.
KOiK04565.
OMAiDPYAYPQ.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6MR06-1 [UniParc]FASTAAdd to Basket

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MKRMLLVSLL AVAMTSCMYK SKKAEAPAPA ESTPTPTATA APQKAQAVLK    50
TIKGSKLKGI IHFTEGDGEM KIETMVEGIK PGPHGFHIHE KGDCSAADFS 100
SAGGHFNPTK GSHAGHDGHG RHVGDMGNLI ADNKSKAITT LVIKGMTMKP 150
GAESIIGKAV VIHADKDDLK SQPAGNSGAR IACGVIQAL 189
Length:189
Mass (Da):19,587
Last modified:July 5, 2004 - v1
Checksum:iCEEFF88AA6D3AD82
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842646 Genomic DNA. Translation: CAE77952.1.
RefSeqiNP_967298.1. NC_005363.1.
WP_011162893.1. NC_005363.1.

Genome annotation databases

EnsemblBacteriaiCAE77952; CAE77952; Bd0295.
GeneIDi2733071.
KEGGibba:Bd0295.
PATRICi21075364. VBIBdeBac73187_0272.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842646 Genomic DNA. Translation: CAE77952.1 .
RefSeqi NP_967298.1. NC_005363.1.
WP_011162893.1. NC_005363.1.

3D structure databases

ProteinModelPortali Q6MR06.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 264462.Bd0295.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE77952 ; CAE77952 ; Bd0295 .
GeneIDi 2733071.
KEGGi bba:Bd0295.
PATRICi 21075364. VBIBdeBac73187_0272.

Phylogenomic databases

HOGENOMi HOG000263447.
KOi K04565.
OMAi DPYAYPQ.
OrthoDBi EOG6K13RS.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
PRINTSi PR00068. CUZNDISMTASE.
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
    Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
    Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100.

Entry informationi

Entry nameiQ6MR06_BDEBA
AccessioniPrimary (citable) accession number: Q6MR06
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 3, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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