Q6MR06 (Q6MR06_BDEBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393

Gene names

Name:	sodC EMBL CAE77952.1
Ordered Locus Names:	Bd0295

Organism

Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [Complete proteome] [HAMAP]

Taxonomic identifier

264462 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Bdellovibrionales › Bdellovibrionaceae › Bdellovibrio › Bdellovibrio bacteriovorus

Protein attributes

Sequence length	189 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393
Cofactor	Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393
Sequence similarities	Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Ontologies

Keywords
Domain	Signal EMBL CAE77952.1
Ligand	Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393
Molecular function	Oxidoreductase RuleBase RU000393 EMBL CAE77952.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 14	14	Potential EMBL CAE77952.1
	Chain	15 – 189	175	Potential EMBL CAE77952.1		PRO_5000097946

Sequences

	Sequence		Length	Mass (Da)
	Q6MR06 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: CEEFF88AA6D3AD82	FASTA	189	19,587
	10 20 30 40 50 60 MKRMLLVSLL AVAMTSCMYK SKKAEAPAPA ESTPTPTATA APQKAQAVLK TIKGSKLKGI 70 80 90 100 110 120 IHFTEGDGEM KIETMVEGIK PGPHGFHIHE KGDCSAADFS SAGGHFNPTK GSHAGHDGHG 130 140 150 160 170 180 RHVGDMGNLI ADNKSKAITT LVIKGMTMKP GAESIIGKAV VIHADKDDLK SQPAGNSGAR IACGVIQAL

References

[1]

"A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective." Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C. Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX842646 Genomic DNA. Translation: CAE77952.1.
RefSeq	NP_967298.1. NC_005363.1.
3D structure databases
HSSP	HSSP built from PDB template 1BA9 based on UniProtKB P00441.
ProteinModelPortal	Q6MR06.
ModBase	Search...
Protein-protein interaction databases
STRING	264462.Bd0295.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAE77952; CAE77952; Bd0295.
GeneID	2733071.
KEGG	bba:Bd0295.
PATRIC	21075364. VBIBdeBac73187_0272.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000263447.
KO	K04565.
OMA	IHEFGDC.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
PRINTS	PR00068. CUZNDISMTASE.
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
PROSITE	PS00087. SOD_CU_ZN_1. 1 hit. PS00332. SOD_CU_ZN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6MR06_BDEBA

Accession

Primary (citable) accession number: Q6MR06

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 72 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)