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Q6MR06

- Q6MR06_BDEBA

UniProt

Q6MR06 - Q6MR06_BDEBA

Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodCImported
    Ordered Locus Names:Bd0295Imported
    OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)Imported
    Taxonomic identifieri264462 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
    ProteomesiUP000008080: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1414 PotentialImportedAdd
    BLAST
    Chaini15 – 189175 PotentialImportedPRO_5000097946Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi264462.Bd0295.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6MR06.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000263447.
    KOiK04565.
    OMAiDPYAYPQ.
    OrthoDBiEOG6K13RS.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    PRINTSiPR00068. CUZNDISMTASE.
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q6MR06-1 [UniParc]FASTAAdd to Basket

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    MKRMLLVSLL AVAMTSCMYK SKKAEAPAPA ESTPTPTATA APQKAQAVLK    50
    TIKGSKLKGI IHFTEGDGEM KIETMVEGIK PGPHGFHIHE KGDCSAADFS 100
    SAGGHFNPTK GSHAGHDGHG RHVGDMGNLI ADNKSKAITT LVIKGMTMKP 150
    GAESIIGKAV VIHADKDDLK SQPAGNSGAR IACGVIQAL 189
    Length:189
    Mass (Da):19,587
    Last modified:July 5, 2004 - v1
    Checksum:iCEEFF88AA6D3AD82
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX842646 Genomic DNA. Translation: CAE77952.1.
    RefSeqiNP_967298.1. NC_005363.1.
    WP_011162893.1. NC_005363.1.

    Genome annotation databases

    EnsemblBacteriaiCAE77952; CAE77952; Bd0295.
    GeneIDi2733071.
    KEGGibba:Bd0295.
    PATRICi21075364. VBIBdeBac73187_0272.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX842646 Genomic DNA. Translation: CAE77952.1 .
    RefSeqi NP_967298.1. NC_005363.1.
    WP_011162893.1. NC_005363.1.

    3D structure databases

    ProteinModelPortali Q6MR06.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 264462.Bd0295.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAE77952 ; CAE77952 ; Bd0295 .
    GeneIDi 2733071.
    KEGGi bba:Bd0295.
    PATRICi 21075364. VBIBdeBac73187_0272.

    Phylogenomic databases

    HOGENOMi HOG000263447.
    KOi K04565.
    OMAi DPYAYPQ.
    OrthoDBi EOG6K13RS.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    PRINTSi PR00068. CUZNDISMTASE.
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
      Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
      Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100Imported.

    Entry informationi

    Entry nameiQ6MR06_BDEBA
    AccessioniPrimary (citable) accession number: Q6MR06
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 81 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3