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Protein
Submitted name:

Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11

Gene

Bd0564

Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Serine proteaseUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11Imported (EC:3.4.21.4Imported)
Gene namesi
Ordered Locus Names:Bd0564Imported
OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)Imported
Taxonomic identifieri264462 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
ProteomesiUP000008080 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264462.Bd0564.

Structurei

3D structure databases

ProteinModelPortaliQ6MQB3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase S1 family.UniRule annotation

Phylogenomic databases

KOiK01312.
OrthoDBiEOG6Z3KH6.

Family and domain databases

InterProiIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSiPR00722. CHYMOTRYPSIN.
SMARTiSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.
PROSITEiPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6MQB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKCFLIFLF LLSACAPALQ EPVTEHLLQE DLDSAIVGGR RVRANDPRAN
60 70 80 90 100
WVVMVRGTKG FFLFKGSGIC TGAFITEDIV LTAAHCVTEK GATYEVAYGL
110 120 130 140 150
SPLEEKRKVI KIDKVLVHED YAPSTESLNP NDIALIKIRG TKPARLKVLG
160 170 180 190 200
LQVEPPLEQP TTFLAIGYGN TAAGPKINER GILHSTPTII TDINDTHLIG
210 220 230 240 250
NQRNGIGICQ GDSGGPLLKA DEKGEPAIIG ITHATFRYKG DPVNSNECYN
260 270
RAAYVNIAHQ MAWIQKNVAL ISDEPLK
Length:277
Mass (Da):30,172
Last modified:July 5, 2004 - v1
Checksum:i7ED6A0076F963BB2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX842647 Genomic DNA. Translation: CAE78534.1.
RefSeqiNP_967541.1. NC_005363.1.
WP_011163136.1. NC_005363.1.

Genome annotation databases

EnsemblBacteriaiCAE78534; CAE78534; Bd0564.
KEGGibba:Bd0564.
PATRICi21075848. VBIBdeBac73187_0513.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX842647 Genomic DNA. Translation: CAE78534.1.
RefSeqiNP_967541.1. NC_005363.1.
WP_011163136.1. NC_005363.1.

3D structure databases

ProteinModelPortaliQ6MQB3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi264462.Bd0564.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE78534; CAE78534; Bd0564.
KEGGibba:Bd0564.
PATRICi21075848. VBIBdeBac73187_0513.

Phylogenomic databases

KOiK01312.
OrthoDBiEOG6Z3KH6.

Family and domain databases

InterProiIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSiPR00722. CHYMOTRYPSIN.
SMARTiSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.
PROSITEiPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
    Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
    Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100Imported.

Entry informationi

Entry nameiQ6MQB3_BDEBA
AccessioniPrimary (citable) accession number: Q6MQB3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 27, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.