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Q6MNM3

- Q6MNM3_BDEBA

UniProt

Q6MNM3 - Q6MNM3_BDEBA

Protein

Alpha-amylase

Gene

amy

Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Name:amyImported
    Ordered Locus Names:Bd1224Imported
    OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)Imported
    Taxonomic identifieri264462 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
    ProteomesiUP000008080: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi264462.Bd1224.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6MNM3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiSNTYITA.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q6MNM3-1 [UniParc]FASTAAdd to Basket

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    MIRSLSLGFT AFLLTLASCL SAAAAPRTVF VQLFEWPWND VARECETYLG    50
    PAGFSAVQVS PPHEHIHWQG NPWWERYQVV SYKLESRSGT EAEFADMVRR 100
    CRQAGVDVYA DAILNHMTGI PGGVGSAGTQ FSHYEYPGLY SPQDFHHCGR 150
    NGNNDIRDFR DLYELQNCEL VDLADLKTES TYVQEKQAEY LNRLLDLGVA 200
    GFRIDAAKHI PARDLDQILK RLKRSAYIYS EIIYDPAGPV QYAEYTPFSD 250
    VTAYDYPHRL GYAFKDKNTE ALQFIASGFP NSIDSIVFVT NHDIERTNDY 300
    SVLKYSSPEQ HLYRLAQIFM LAWPFGYPQV YSGFDFNSFD QGPPLNDNLR 350
    TLPILDEQNQ CRAPWTCEHR LPEVAAMVDF RNQTDKAFSV SNWSTHGRDV 400
    ISFARPRFGF VAMNFGGQSV TKEFQTNLPA GEYCNIVDSG YRLKSRSCAK 450
    GFSVNNSGKV RATLAPYSSL VLLVKAQVKK 480
    Length:480
    Mass (Da):54,343
    Last modified:July 5, 2004 - v1
    Checksum:iCC8F1C3009BECCAA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX842649 Genomic DNA. Translation: CAE79128.1.
    RefSeqiNP_968135.1. NC_005363.1.

    Genome annotation databases

    EnsemblBacteriaiCAE79128; CAE79128; Bd1224.
    GeneIDi2734445.
    KEGGibba:Bd1224.
    PATRICi21077054. VBIBdeBac73187_1107.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX842649 Genomic DNA. Translation: CAE79128.1 .
    RefSeqi NP_968135.1. NC_005363.1.

    3D structure databases

    ProteinModelPortali Q6MNM3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 264462.Bd1224.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAE79128 ; CAE79128 ; Bd1224 .
    GeneIDi 2734445.
    KEGGi bba:Bd1224.
    PATRICi 21077054. VBIBdeBac73187_1107.

    Phylogenomic databases

    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi SNTYITA.
    OrthoDBi EOG6RZB1B.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
      Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
      Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100Imported.

    Entry informationi

    Entry nameiQ6MNM3_BDEBA
    AccessioniPrimary (citable) accession number: Q6MNM3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3