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Q6MNM3

- Q6MNM3_BDEBA

UniProt

Q6MNM3 - Q6MNM3_BDEBA

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Protein
Alpha-amylase
Gene
amy, Bd1224
Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyImported
Ordered Locus Names:Bd1224Imported
OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Taxonomic identifieri264462 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
ProteomesiUP000008080: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264462.Bd1224.

Structurei

3D structure databases

ProteinModelPortaliQ6MNM3.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000253313.
KOiK01176.
OMAiSNTYITA.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6MNM3-1 [UniParc]FASTAAdd to Basket

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MIRSLSLGFT AFLLTLASCL SAAAAPRTVF VQLFEWPWND VARECETYLG    50
PAGFSAVQVS PPHEHIHWQG NPWWERYQVV SYKLESRSGT EAEFADMVRR 100
CRQAGVDVYA DAILNHMTGI PGGVGSAGTQ FSHYEYPGLY SPQDFHHCGR 150
NGNNDIRDFR DLYELQNCEL VDLADLKTES TYVQEKQAEY LNRLLDLGVA 200
GFRIDAAKHI PARDLDQILK RLKRSAYIYS EIIYDPAGPV QYAEYTPFSD 250
VTAYDYPHRL GYAFKDKNTE ALQFIASGFP NSIDSIVFVT NHDIERTNDY 300
SVLKYSSPEQ HLYRLAQIFM LAWPFGYPQV YSGFDFNSFD QGPPLNDNLR 350
TLPILDEQNQ CRAPWTCEHR LPEVAAMVDF RNQTDKAFSV SNWSTHGRDV 400
ISFARPRFGF VAMNFGGQSV TKEFQTNLPA GEYCNIVDSG YRLKSRSCAK 450
GFSVNNSGKV RATLAPYSSL VLLVKAQVKK 480
Length:480
Mass (Da):54,343
Last modified:July 5, 2004 - v1
Checksum:iCC8F1C3009BECCAA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842649 Genomic DNA. Translation: CAE79128.1.
RefSeqiNP_968135.1. NC_005363.1.

Genome annotation databases

EnsemblBacteriaiCAE79128; CAE79128; Bd1224.
GeneIDi2734445.
KEGGibba:Bd1224.
PATRICi21077054. VBIBdeBac73187_1107.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842649 Genomic DNA. Translation: CAE79128.1 .
RefSeqi NP_968135.1. NC_005363.1.

3D structure databases

ProteinModelPortali Q6MNM3.
ModBasei Search...

Protein-protein interaction databases

STRINGi 264462.Bd1224.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE79128 ; CAE79128 ; Bd1224 .
GeneIDi 2734445.
KEGGi bba:Bd1224.
PATRICi 21077054. VBIBdeBac73187_1107.

Phylogenomic databases

HOGENOMi HOG000253313.
KOi K01176.
OMAi SNTYITA.
OrthoDBi EOG6RZB1B.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
    Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
    Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100.

Entry informationi

Entry nameiQ6MNM3_BDEBA
AccessioniPrimary (citable) accession number: Q6MNM3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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