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Q6MNM3

- Q6MNM3_BDEBA

UniProt

Q6MNM3 - Q6MNM3_BDEBA

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Protein

Alpha-amylase

Gene

amy

Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyImported
Ordered Locus Names:Bd1224Imported
OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)Imported
Taxonomic identifieri264462 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
ProteomesiUP000008080: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264462.Bd1224.

Structurei

3D structure databases

ProteinModelPortaliQ6MNM3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000253313.
KOiK01176.
OMAiSNTYITA.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6MNM3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIRSLSLGFT AFLLTLASCL SAAAAPRTVF VQLFEWPWND VARECETYLG
60 70 80 90 100
PAGFSAVQVS PPHEHIHWQG NPWWERYQVV SYKLESRSGT EAEFADMVRR
110 120 130 140 150
CRQAGVDVYA DAILNHMTGI PGGVGSAGTQ FSHYEYPGLY SPQDFHHCGR
160 170 180 190 200
NGNNDIRDFR DLYELQNCEL VDLADLKTES TYVQEKQAEY LNRLLDLGVA
210 220 230 240 250
GFRIDAAKHI PARDLDQILK RLKRSAYIYS EIIYDPAGPV QYAEYTPFSD
260 270 280 290 300
VTAYDYPHRL GYAFKDKNTE ALQFIASGFP NSIDSIVFVT NHDIERTNDY
310 320 330 340 350
SVLKYSSPEQ HLYRLAQIFM LAWPFGYPQV YSGFDFNSFD QGPPLNDNLR
360 370 380 390 400
TLPILDEQNQ CRAPWTCEHR LPEVAAMVDF RNQTDKAFSV SNWSTHGRDV
410 420 430 440 450
ISFARPRFGF VAMNFGGQSV TKEFQTNLPA GEYCNIVDSG YRLKSRSCAK
460 470 480
GFSVNNSGKV RATLAPYSSL VLLVKAQVKK
Length:480
Mass (Da):54,343
Last modified:July 5, 2004 - v1
Checksum:iCC8F1C3009BECCAA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842649 Genomic DNA. Translation: CAE79128.1.
RefSeqiNP_968135.1. NC_005363.1.
WP_011163730.1. NC_005363.1.

Genome annotation databases

EnsemblBacteriaiCAE79128; CAE79128; Bd1224.
GeneIDi2734445.
KEGGibba:Bd1224.
PATRICi21077054. VBIBdeBac73187_1107.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842649 Genomic DNA. Translation: CAE79128.1 .
RefSeqi NP_968135.1. NC_005363.1.
WP_011163730.1. NC_005363.1.

3D structure databases

ProteinModelPortali Q6MNM3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 264462.Bd1224.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE79128 ; CAE79128 ; Bd1224 .
GeneIDi 2734445.
KEGGi bba:Bd1224.
PATRICi 21077054. VBIBdeBac73187_1107.

Phylogenomic databases

HOGENOMi HOG000253313.
KOi K01176.
OMAi SNTYITA.
OrthoDBi EOG6RZB1B.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
    Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
    Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100Imported.

Entry informationi

Entry nameiQ6MNM3_BDEBA
AccessioniPrimary (citable) accession number: Q6MNM3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3