Q6MN60 (Q6MN60_BDEBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393

Gene names

Name:	sodC EMBL CAE79292.1
Ordered Locus Names:	Bd1401

Organism

Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [Complete proteome] [HAMAP]

Taxonomic identifier

264462 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Bdellovibrionales › Bdellovibrionaceae › Bdellovibrio › Bdellovibrio bacteriovorus

Protein attributes

Sequence length	180 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393
Cofactor	Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393
Sequence similarities	Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Ontologies

Keywords
Ligand	Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393
Molecular function	Oxidoreductase RuleBase RU000393 EMBL CAE79292.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6MN60 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 7D56CCFAE8FF2B7E	FASTA	180	18,938
	10 20 30 40 50 60 MYKALSKALV LTLLGASSVS AQQDPVAIII RNAKGEQVGN ATLTDVTNGM RIQMELQNLP 70 80 90 100 110 120 PGEKAFHIHE KGLCTAPDFK SAGGHFNPDK KKHGHKVKGG PHAGDFSNIV VKEDGTASVD 130 140 150 160 170 180 VVNPMLTVHA GKNSVISNEG TSIVIHAKAD DYKSQPAGDA GDRIACGEIK TPPESKPVIK

References

[1]

"A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective." Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C. Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX842649 Genomic DNA. Translation: CAE79292.1.
RefSeq	NP_968299.1. NC_005363.1.
3D structure databases
HSSP	HSSP built from PDB template 1AZV based on UniProtKB P00441.
ProteinModelPortal	Q6MN60.
ModBase	Search...
Protein-protein interaction databases
STRING	264462.Bd1401.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAE79292; CAE79292; Bd1401.
GeneID	2735663.
KEGG	bba:Bd1401.
PATRIC	21077388. VBIBdeBac73187_1273.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000263448.
KO	K04565.
OMA	HVNPSCD.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024136. SOD_Cu/Zn. IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit. PTHR10003:SF11. PTHR10003:SF11. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
PROSITE	PS00332. SOD_CU_ZN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6MN60_BDEBA

Accession

Primary (citable) accession number: Q6MN60

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)