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Q6MLI2

- SYR_BDEBA

UniProt

Q6MLI2 - SYR_BDEBA

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:Bd2027
OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Taxonomic identifieri264462 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
ProteomesiUP000008080: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 580580Arginine--tRNA ligasePRO_0000241990Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi264462.Bd2027.

Structurei

3D structure databases

ProteinModelPortaliQ6MLI2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi127 – 13711"HIGH" regionAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0018.
KOiK01887.
OMAiYVKFHDE.
OrthoDBiEOG6JB13C.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6MLI2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIKHDSIRLL ATNLLKDAIG RAYPDFSASE DDIYKALVNP PKSDLGDLAF
60 70 80 90 100
GCFILAKALK TAPPQVATAV AAQMKGATAV AAGPYINIRF DEQTHGEQVL
110 120 130 140 150
ATILDGSYFK KPLMEKSPKT MIEYSQPNTH KELHVGHMRN LCLGDAIVRM
160 170 180 190 200
LRYSGREIVS STFPGDMGTH VAKCLWYMKK HNQEPVPETE KGEWLGRMYS
210 220 230 240 250
KANLLLEDQN GTPQEDINRQ ELTAILHQLE GKTGPYYDLW LETREWSIEL
260 270 280 290 300
MKKVYAWADV TFDEWYFESE MDSPSAAWVK QLYAEGKLEM SQGAIGKDLE
310 320 330 340 350
SEKLGFCMLL KSDGTGLYAT KDLLLAKHKF EDVKIEKSVY VVDMRQALHF
360 370 380 390 400
KQVFRVLEIL GFEQAKNCFH LQYNYVELPD GAMSSRKGNI VPLRELVHRM
410 420 430 440 450
EDHVKTTYLS RYKGEWSEED VEKIAGQVAK GAIFYGMLRM DTNKKIVFDM
460 470 480 490 500
NEWLKLDGES GPFVQYSYAR ISSLGRKFPR TAGAKIDWSR LNHASERQLM
510 520 530 540 550
QSLGGFNTAV AAAAENFKPS AICTYLYDLA KSFNVFYHEC PIGTEADVAT
560 570 580
REARLALSEA VGLTLKNGLA VLGMPAPEKM
Length:580
Mass (Da):65,364
Last modified:July 5, 2004 - v1
Checksum:iF4A9AA2260E1B08D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842651 Genomic DNA. Translation: CAE79875.1.
RefSeqiNP_968882.1. NC_005363.1.

Genome annotation databases

EnsemblBacteriaiCAE79875; CAE79875; Bd2027.
GeneIDi2734744.
KEGGibba:Bd2027.
PATRICi21078558. VBIBdeBac73187_1846.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842651 Genomic DNA. Translation: CAE79875.1 .
RefSeqi NP_968882.1. NC_005363.1.

3D structure databases

ProteinModelPortali Q6MLI2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 264462.Bd2027.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE79875 ; CAE79875 ; Bd2027 .
GeneIDi 2734744.
KEGGi bba:Bd2027.
PATRICi 21078558. VBIBdeBac73187_1846.

Phylogenomic databases

eggNOGi COG0018.
KOi K01887.
OMAi YVKFHDE.
OrthoDBi EOG6JB13C.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
    Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
    Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100.

Entry informationi

Entry nameiSYR_BDEBA
AccessioniPrimary (citable) accession number: Q6MLI2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3