Q6MIN0 (Q6MIN0_BDEBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alr protein EMBL CAE80883.1
EC=5.1.1.1 EMBL CAE80883.1

Gene names

Name:	alr EMBL CAE80883.1
Ordered Locus Names:	Bd3124

Organism

Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [Complete proteome] [HAMAP]

Taxonomic identifier

264462 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Bdellovibrionales › Bdellovibrionaceae › Bdellovibrio › Bdellovibrio bacteriovorus

Protein attributes

Sequence length	402 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL CAE80883.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6MIN0 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 7BD16590776C52A6	FASTA	402	44,972
	10 20 30 40 50 60 MEMYRRTFAE INLDHLKHNI QVLQKAFPQA PFLCPMVKAN AYGHGDVQLA RFLESLGIKH 70 80 90 100 110 120 LGVCLIEEGL LLRRSGVNAE ILVFRGFDRE GAEKIIEYNM TPVVSSWEQI DHLEAVASDP 130 140 150 160 170 180 VGIHLKFDTG MNRLGFRPEE AQKLFDRLWQ NKKIRLKALV THLFNGEDAT DSQGISARQL 190 200 210 220 230 240 RDLNRVSTVF KPFNIFCHAL NSAGIMSALQ MKDAGNTPAD HPLFMQNWGL RPGLMIYGYN 250 260 270 280 290 300 PLGQNSFGGL KPVMSLKSHV ATYRQLHIGE TVSYGGTWTA KQDSVIAVVP IGYADGYHRI 310 320 330 340 350 360 LSNQSSVVFA GKRVPLVGSI CMDYLMLDVT EVVRGKDLKD FKDQEVTLFG FASDGSFLSP 370 380 390 400 EELAVQAKSI TWEMLTSVGE RVPRIYSGLD VGFVFEESRG QR

References

[1]

"A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective." Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C. Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX842654 Genomic DNA. Translation: CAE80883.1.
RefSeq	NP_969890.1. NC_005363.1.
3D structure databases
HSSP	HSSP built from PDB template 1BD0 based on UniProtKB P10724.
ProteinModelPortal	Q6MIN0.
ModBase	Search...
Protein-protein interaction databases
STRING	264462.Bd3124.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAE80883; CAE80883; Bd3124.
GeneID	2736719.
KEGG	bba:Bd3124.
PATRIC	21080604. VBIBdeBac73187_2857.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031444.
KO	K01775.
OMA	NITITLY.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6MIN0_BDEBA

Accession

Primary (citable) accession number: Q6MIN0

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)