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Q6MIN0 (Q6MIN0_BDEBA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length402 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site381Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2741Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1331Substrate By similarity HAMAP-Rule MF_01201
Binding site3221Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue381N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
Q6MIN0 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 7BD16590776C52A6

FASTA40244,972
        10         20         30         40         50         60 
MEMYRRTFAE INLDHLKHNI QVLQKAFPQA PFLCPMVKAN AYGHGDVQLA RFLESLGIKH 

        70         80         90        100        110        120 
LGVCLIEEGL LLRRSGVNAE ILVFRGFDRE GAEKIIEYNM TPVVSSWEQI DHLEAVASDP 

       130        140        150        160        170        180 
VGIHLKFDTG MNRLGFRPEE AQKLFDRLWQ NKKIRLKALV THLFNGEDAT DSQGISARQL 

       190        200        210        220        230        240 
RDLNRVSTVF KPFNIFCHAL NSAGIMSALQ MKDAGNTPAD HPLFMQNWGL RPGLMIYGYN 

       250        260        270        280        290        300 
PLGQNSFGGL KPVMSLKSHV ATYRQLHIGE TVSYGGTWTA KQDSVIAVVP IGYADGYHRI 

       310        320        330        340        350        360 
LSNQSSVVFA GKRVPLVGSI CMDYLMLDVT EVVRGKDLKD FKDQEVTLFG FASDGSFLSP 

       370        380        390        400 
EELAVQAKSI TWEMLTSVGE RVPRIYSGLD VGFVFEESRG QR 

« Hide

References

[1]"A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX842654 Genomic DNA. Translation: CAE80883.1.
RefSeqNP_969890.1. NC_005363.1.

3D structure databases

ProteinModelPortalQ6MIN0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING264462.Bd3124.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE80883; CAE80883; Bd3124.
GeneID2736719.
KEGGbba:Bd3124.
PATRIC21080604. VBIBdeBac73187_2857.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031444.
KOK01775.
OMAITMDQLM.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ6MIN0_BDEBA
AccessionPrimary (citable) accession number: Q6MIN0
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)