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Q6MHD3

- Q6MHD3_BDEBA

UniProt

Q6MHD3 - Q6MHD3_BDEBA

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Protein

Superoxide dismutase

Gene

sodB

Organism
Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:Bd3617Imported
OrganismiBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)Imported
Taxonomic identifieri264462 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBdellovibrionaceaeBdellovibrio
ProteomesiUP000008080: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264462.Bd3617.

Structurei

3D structure databases

ProteinModelPortaliQ6MHD3.
SMRiQ6MHD3. Positions 2-196.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiNEMECAP.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6MHD3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFKLPNLPYA KTGIAPLFNE EQMTYHYDKH HKAYIDNLNK FMETDASLKG
60 70 80 90 100
KSLEEITLTS TGGIFNNAAQ AWNHTFFWFG MSPAGQGGQP SAELSAAITR
110 120 130 140 150
DFGSMDELKA KFVDGGVKTF GSGWIWLCMD AAGKLSLVST SNAAVPFTNN
160 170 180 190 200
GPTPLLVADV WEHAYYVDYR NLRAKYLETF WAQVNWNFVS ENFASKKVRD

LTKSMT
Length:206
Mass (Da):23,077
Last modified:July 5, 2004 - v1
Checksum:i80A93190CAFE37D7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842656 Genomic DNA. Translation: CAE80994.1.
RefSeqiNP_970340.1. NC_005363.1.
WP_011165937.1. NC_005363.1.

Genome annotation databases

EnsemblBacteriaiCAE80994; CAE80994; Bd3617.
GeneIDi2737307.
KEGGibba:Bd3617.
PATRICi21081518. VBIBdeBac73187_3314.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX842656 Genomic DNA. Translation: CAE80994.1 .
RefSeqi NP_970340.1. NC_005363.1.
WP_011165937.1. NC_005363.1.

3D structure databases

ProteinModelPortali Q6MHD3.
SMRi Q6MHD3. Positions 2-196.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 264462.Bd3617.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE80994 ; CAE80994 ; Bd3617 .
GeneIDi 2737307.
KEGGi bba:Bd3617.
PATRICi 21081518. VBIBdeBac73187_3314.

Phylogenomic databases

HOGENOMi HOG000013584.
KOi K04564.
OMAi NEMECAP.
OrthoDBi EOG63NMNT.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective."
    Rendulic S., Jagtap P., Rosinus A., Eppinger M., Baar C., Lanz C., Keller H., Lambert C., Evans K.J., Goesmann A., Meyer F., Sockett R.E., Schuster S.C.
    Science 303:689-692(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100Imported.

Entry informationi

Entry nameiQ6MHD3_BDEBA
AccessioniPrimary (citable) accession number: Q6MHD3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3