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Protein
Submitted name:

Lymphocyte antigen 6 complex locus G6E

Gene

Ly6g6e

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Lymphocyte antigen 6 complex locus G6EImported
Submitted name:
Lymphocyte antigen 6 complex, locus G6EImported
Submitted name:
Lymphocyte antigen 6 family member G6EImported
Gene namesi
Name:Ly6g6eImported
Synonyms:ApomImported, Bat4Imported, C2Imported, C4aImported, CfbImported, Csnk2bImported, G7eImported, Hspa1aImported, Hspa1bImported, Hspa1lImported, Ly6g5cImported, Ly6g6cImported, ly6g6eImported, Neu1Imported, Ng35Imported, Rps25-ps2Imported, Stk19Imported
ORF Names:rCG_38315Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi1303112. Ly6g6e.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_501050705119 – 133Sequence analysisAdd BLAST115

Expressioni

Gene expression databases

BgeeiENSRNOG00000027157.

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 103UPAR/Ly6InterPro annotationAdd BLAST74

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410JD5T. Eukaryota.
ENOG41118E3. LUCA.
GeneTreeiENSGT00390000007175.
HOGENOMiHOG000231230.
HOVERGENiHBG061951.
KOiK06846.
OMAiTYWSRSY.
OrthoDBiEOG091G0VUR.
TreeFamiTF338408.

Family and domain databases

InterProiView protein in InterPro
IPR016054. LY6_UPA_recep-like.
PfamiView protein in Pfam
PF00021. UPAR_LY6. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6MG57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLSSAFLGL LFLSGTLGLT TSPTRGRLHC YTCSFAKPCY PVLTECREDE
60 70 80 90 100
VCGVSVGTSE QNKDVIERKG CLPRAQCPLL GHTTYWSRSY TLQHQCCEQD
110 120 130
LCNTAASQRP PSLPLMTLLP LAAIFGWRVH IVL
Length:133
Mass (Da):14,635
Last modified:July 5, 2004 - v1
Checksum:iC600D9EC77FF4CB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094348 Genomic DNA. No translation available.
KU253681 mRNA. Translation: APT43277.1.
BX883045 Genomic DNA. Translation: CAE83989.1.
CH474121 Genomic DNA. Translation: EDL83509.1.
RefSeqiNP_001001972.1. NM_001001972.1.
UniGeneiRn.205716.

Genome annotation databases

EnsembliENSRNOT00000037482; ENSRNOP00000032019; ENSRNOG00000027157.
GeneIDi406866.
KEGGirno:406866.
UCSCiRGD:1303112. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094348 Genomic DNA. No translation available.
KU253681 mRNA. Translation: APT43277.1.
BX883045 Genomic DNA. Translation: CAE83989.1.
CH474121 Genomic DNA. Translation: EDL83509.1.
RefSeqiNP_001001972.1. NM_001001972.1.
UniGeneiRn.205716.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000037482; ENSRNOP00000032019; ENSRNOG00000027157.
GeneIDi406866.
KEGGirno:406866.
UCSCiRGD:1303112. rat.

Organism-specific databases

CTDi79136.
RGDi1303112. Ly6g6e.

Phylogenomic databases

eggNOGiENOG410JD5T. Eukaryota.
ENOG41118E3. LUCA.
GeneTreeiENSGT00390000007175.
HOGENOMiHOG000231230.
HOVERGENiHBG061951.
KOiK06846.
OMAiTYWSRSY.
OrthoDBiEOG091G0VUR.
TreeFamiTF338408.

Gene expression databases

BgeeiENSRNOG00000027157.

Family and domain databases

InterProiView protein in InterPro
IPR016054. LY6_UPA_recep-like.
PfamiView protein in Pfam
PF00021. UPAR_LY6. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6MG57_RAT
AccessioniPrimary (citable) accession number: Q6MG57
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 7, 2017
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.