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Q6MG57

- Q6MG57_RAT

UniProt

Q6MG57 - Q6MG57_RAT

Protein
Submitted name:

Lymphocyte antigen 6 complex, locus G6E

Gene

Ly6g6e

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 3 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. transforming growth factor beta-activated receptor activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Lymphocyte antigen 6 complex, locus G6EImported
    Submitted name:
    Protein Ly6g6eImported
    Gene namesi
    Name:Ly6g6eImported
    Synonyms:ApomImported, Bat4Imported, C2Imported, C4aImported, CfbImported, Csnk2bImported, G7eImported, Hspa1aImported, Hspa1bImported, Hspa1lImported, Ly6g5cImported, Ly6g6cImported, Neu1Imported, Ng35Imported, Rps25-ps2Imported, Stk19Imported
    ORF Names:rCG_38315Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 20

    Organism-specific databases

    RGDi1303112. Ly6g6e.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ6MG57.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000032019.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG43041.
    GeneTreeiENSGT00390000007175.
    HOGENOMiHOG000231230.
    HOVERGENiHBG061951.
    KOiK06846.
    OMAiCNTAASQ.
    OrthoDBiEOG75J0QV.
    TreeFamiTF338408.

    Family and domain databases

    InterProiIPR000472. Activin_rcpt.
    [Graphical view]
    PfamiPF01064. Activin_recp. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6MG57-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGLSSAFLGL LFLSGTLGLT TSPTRGRLHC YTCSFAKPCY PVLTECREDE    50
    VCGVSVGTSE QNKDVIERKG CLPRAQCPLL GHTTYWSRSY TLQHQCCEQD 100
    LCNTAASQRP PSLPLMTLLP LAAIFGWRVH IVL 133
    Length:133
    Mass (Da):14,635
    Last modified:July 5, 2004 - v1
    Checksum:iC600D9EC77FF4CB4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06099892 Genomic DNA. No translation available.
    BX883045 Genomic DNA. Translation: CAE83989.1.
    CH474121 Genomic DNA. Translation: EDL83509.1.
    RefSeqiNP_001001972.1. NM_001001972.1.
    UniGeneiRn.205716.

    Genome annotation databases

    EnsembliENSRNOT00000037482; ENSRNOP00000032019; ENSRNOG00000027157.
    GeneIDi406866.
    KEGGirno:406866.
    UCSCiRGD:1303112. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06099892 Genomic DNA. No translation available.
    BX883045 Genomic DNA. Translation: CAE83989.1 .
    CH474121 Genomic DNA. Translation: EDL83509.1 .
    RefSeqi NP_001001972.1. NM_001001972.1.
    UniGenei Rn.205716.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000032019.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000037482 ; ENSRNOP00000032019 ; ENSRNOG00000027157 .
    GeneIDi 406866.
    KEGGi rno:406866.
    UCSCi RGD:1303112. rat.

    Organism-specific databases

    CTDi 79136.
    RGDi 1303112. Ly6g6e.

    Phylogenomic databases

    eggNOGi NOG43041.
    GeneTreei ENSGT00390000007175.
    HOGENOMi HOG000231230.
    HOVERGENi HBG061951.
    KOi K06846.
    OMAi CNTAASQ.
    OrthoDBi EOG75J0QV.
    TreeFami TF338408.

    Miscellaneous databases

    NextBioi 696142.

    Gene expression databases

    Genevestigatori Q6MG57.

    Family and domain databases

    InterProi IPR000472. Activin_rcpt.
    [Graphical view ]
    Pfami PF01064. Activin_recp. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Brown NorwayImported.
    2. "The genomic sequence and comparative analysis of the rat major histocompatibility complex."
      Hurt P., Walter L., Sudbrak R., Klages S., Mueller I., Shiina T., Inoko H., Lehrach H., Guenther E., Reinhardt R., Himmelbauer H.
      Genome Res. 14:631-639(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Brown NorwayImported.
    3. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    6. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiQ6MG57_RAT
    AccessioniPrimary (citable) accession number: Q6MG57
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3