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Protein
Submitted name:

Lymphocyte antigen 6 complex locus G6E

Gene

Ly6g6e

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Lymphocyte antigen 6 complex locus G6EImported
Submitted name:
Lymphocyte antigen 6 complex, locus G6EImported
Submitted name:
Lymphocyte antigen 6 family member G6EImported
Gene namesi
Name:Ly6g6eImported
Synonyms:ApomImported, Bat4Imported, C2Imported, C4aImported, CfbImported, Csnk2bImported, G7eImported, Hspa1aImported, Hspa1bImported, Hspa1lImported, Ly6g5cImported, Ly6g6cImported, ly6g6eImported, Neu1Imported, Ng35Imported, Rps25-ps2Imported, Stk19Imported
ORF Names:rCG_38315Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi1303112. Ly6g6e.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_501121029419 – 133Sequence analysisAdd BLAST115

Expressioni

Gene expression databases

BgeeiENSRNOG00000027157.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000032019.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 103UPAR/Ly6InterPro annotationAdd BLAST74

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410JD5T. Eukaryota.
ENOG41118E3. LUCA.
GeneTreeiENSGT00390000007175.
HOGENOMiHOG000231230.
HOVERGENiHBG061951.
KOiK06846.
OMAiTYWSRSY.
OrthoDBiEOG091G0VUR.
TreeFamiTF338408.

Family and domain databases

InterProiView protein in InterPro
IPR016054. LY6_UPA_recep-like.
PfamiView protein in Pfam
PF00021. UPAR_LY6. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6MG57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLSSAFLGL LFLSGTLGLT TSPTRGRLHC YTCSFAKPCY PVLTECREDE
60 70 80 90 100
VCGVSVGTSE QNKDVIERKG CLPRAQCPLL GHTTYWSRSY TLQHQCCEQD
110 120 130
LCNTAASQRP PSLPLMTLLP LAAIFGWRVH IVL
Length:133
Mass (Da):14,635
Last modified:July 5, 2004 - v1
Checksum:iC600D9EC77FF4CB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094348 Genomic DNA. No translation available.
KU253681 mRNA. Translation: APT43277.1.
BX883045 Genomic DNA. Translation: CAE83989.1.
CH474121 Genomic DNA. Translation: EDL83509.1.
RefSeqiNP_001001972.1. NM_001001972.1.
UniGeneiRn.205716.

Genome annotation databases

EnsembliENSRNOT00000037482; ENSRNOP00000032019; ENSRNOG00000027157.
GeneIDi406866.
KEGGirno:406866.
UCSCiRGD:1303112. rat.

Similar proteinsi

Entry informationi

Entry nameiQ6MG57_RAT
AccessioniPrimary (citable) accession number: Q6MG57
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 22, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported