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Protein

Protein ABHD16A

Gene

Abhd16a

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei355 – 3551Charge relay systemBy similarity
Active sitei430 – 4301Charge relay systemBy similarity
Active sitei507 – 5071Charge relay systemBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Protein family/group databases

ESTHERiratno-q6mg55. AlphaBeta_hydrolase.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein ABHD16A (EC:3.-.-.-)
Alternative name(s):
Alpha/beta hydrolase domain-containing protein 16ACurated
Short name:
Abhydrolase domain-containing protein 16AImported
HLA-B-associated transcript 5
Gene namesi
Name:Abhd16aImported
Synonyms:Bat5
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1303164. Abhd16a.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei60 – 8021HelicalSequence analysisAdd
BLAST
Transmembranei93 – 11321HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 558557Protein ABHD16APRO_0000333744Add
BLAST

Proteomic databases

PaxDbiQ6MG55.
PRIDEiQ6MG55.

PTM databases

iPTMnetiQ6MG55.
PhosphoSiteiQ6MG55.
SwissPalmiQ6MG55.

Expressioni

Gene expression databases

BgeeiENSRNOG00000000845.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000001121.

Structurei

3D structure databases

ProteinModelPortaliQ6MG55.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the AB hydrolase superfamily. ABHD16 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1553. Eukaryota.
ENOG410XQU4. LUCA.
HOVERGENiHBG050666.
InParanoidiQ6MG55.
PhylomeDBiQ6MG55.
TreeFamiTF314267.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR000073. AB_hydrolase_1.
IPR026604. ABHD16A.
[Graphical view]
PANTHERiPTHR12277:SF54. PTHR12277:SF54. 1 hit.
PfamiPF00561. Abhydrolase_1. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6MG55-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKLLSCVLG PRLYKIYRER DTDRAATSVP ETPTAVPAAS SSSWDSYYQP
60 70 80 90 100
RALEKHADSI LALASVFWSI SYYSSPFAFF YLYRKGYLSL SKVVPFSHYA
110 120 130 140 150
GTLLVLLAGV ACLRGIGRWT NPQYRQFITI LEATHRNQSA ENKRQLANYN
160 170 180 190 200
FDFRSWPVDF HWEEPSSRKG SRGGPSRRGV ALLRPEPLHR GTADTFLNRV
210 220 230 240 250
KKLPCQITSY LVAHTLGRRM LYPGSVYLLQ KALMPVLLQG QARLVEECNG
260 270 280 290 300
RRAKLLACDG NEIDTMFVDR RGTAEPQGQK LVICCEGNAG FYEVGCVSTP
310 320 330 340 350
LEAGYSVLGW NHPGFAGSTG VPFPQNEANA MDVVVQFAIH RLGFQPQDIV
360 370 380 390 400
IYAWSIGGFT ATWAAMSYPD ISAVILDASF DDLVPLALKV MPDSWRALVT
410 420 430 440 450
RTVRQHLNLN NAEQLCRFQG PVLLVRRTKD EIITTTVPED IMSNRGNDLL
460 470 480 490 500
LKLLQFRYPR VMTEEGLRAV RQWLEASSQL EEASIYSRWE VDEDWCVSVL
510 520 530 540 550
RSYQAEHGPD FPWSVGEDMS VDGRRQLALF LARKHLHNFE ATHCTPLPAQ

HFQMPWCL
Length:558
Mass (Da):63,038
Last modified:July 5, 2004 - v1
Checksum:i48DDFC0D95C2021F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX883045 Genomic DNA. Translation: CAE83991.1.
BC091227 mRNA. Translation: AAH91227.1.
RefSeqiNP_997696.1. NM_212531.2.
UniGeneiRn.203264.

Genome annotation databases

GeneIDi361796.
KEGGirno:361796.
UCSCiRGD:1303164. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX883045 Genomic DNA. Translation: CAE83991.1.
BC091227 mRNA. Translation: AAH91227.1.
RefSeqiNP_997696.1. NM_212531.2.
UniGeneiRn.203264.

3D structure databases

ProteinModelPortaliQ6MG55.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000001121.

Protein family/group databases

ESTHERiratno-q6mg55. AlphaBeta_hydrolase.

PTM databases

iPTMnetiQ6MG55.
PhosphoSiteiQ6MG55.
SwissPalmiQ6MG55.

Proteomic databases

PaxDbiQ6MG55.
PRIDEiQ6MG55.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi361796.
KEGGirno:361796.
UCSCiRGD:1303164. rat.

Organism-specific databases

CTDi7920.
RGDi1303164. Abhd16a.

Phylogenomic databases

eggNOGiKOG1553. Eukaryota.
ENOG410XQU4. LUCA.
HOVERGENiHBG050666.
InParanoidiQ6MG55.
PhylomeDBiQ6MG55.
TreeFamiTF314267.

Miscellaneous databases

PROiQ6MG55.

Gene expression databases

BgeeiENSRNOG00000000845.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR000073. AB_hydrolase_1.
IPR026604. ABHD16A.
[Graphical view]
PANTHERiPTHR12277:SF54. PTHR12277:SF54. 1 hit.
PfamiPF00561. Abhydrolase_1. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiABHGA_RAT
AccessioniPrimary (citable) accession number: Q6MG55
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.