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Q6MG14 (NRM_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nurim
Alternative name(s):
Nuclear envelope membrane protein
Nuclear rim protein
Gene names
Name:Nrm
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length262 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Nucleus inner membrane; Multi-pass membrane protein By similarity.

Sequence similarities

Belongs to the nurim family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 262262Nurim
PRO_0000299400

Regions

Topological domain1 – 44Nuclear Potential
Transmembrane5 – 2824Helical; Potential
Topological domain29 – 5830Perinuclear space Potential
Transmembrane59 – 8022Helical; Potential
Topological domain81 – 9717Nuclear Potential
Transmembrane98 – 11417Helical; Potential
Topological domain115 – 13319Perinuclear space Potential
Transmembrane134 – 16431Helical; Potential
Topological domain165 – 19127Nuclear Potential
Transmembrane192 – 21019Helical; Potential
Topological domain211 – 2166Perinuclear space Potential
Transmembrane217 – 23418Helical; Potential
Topological domain235 – 26228Nuclear Potential
Compositional bias67 – 726Poly-Leu
Compositional bias139 – 253115Leu-rich

Sequences

Sequence LengthMass (Da)Tools
Q6MG14 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: FEAC40DA59359772

FASTA26229,382
        10         20         30         40         50         60 
MAPALLLVPA ALASFVLAFG TGVEFVRFTS LRPLLGGIPE SGGPDARHGW LAALQDRSIL 

        70         80         90        100        110        120 
ASLAWDLCLL LLFVVQHSLM ATEAVKAWTS RYFGVLQRSL YVACTALALQ LVMRYWEATP 

       130        140        150        160        170        180 
RGPVLWEARA EPWATWVPLL CFVLHVVSWL LIFSILLVFD YAELMGLKQV YYHVLGLGEP 

       190        200        210        220        230        240 
LSLKSPRALR LFSHLRHPVC VELLTVLWVV PTLGTDRLLL ALLFTLYLGL AHGLDQQDLR 

       250        260 
YLRSQLQRKL QLLSRPQDGE AE 

« Hide

References

[1]"The genomic sequence and comparative analysis of the rat major histocompatibility complex."
Hurt P., Walter L., Sudbrak R., Klages S., Mueller I., Shiina T., Inoko H., Lehrach H., Guenther E., Reinhardt R., Himmelbauer H.
Genome Res. 14:631-639(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Brown Norway.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX883048 Genomic DNA. Translation: CAE84033.1.
RefSeqNP_997673.1. NM_212508.2.
UniGeneRn.38521.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid262960. 1 interaction.
STRING10116.ENSRNOP00000001085.

Proteomic databases

PaxDbQ6MG14.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000001085; ENSRNOP00000001085; ENSRNOG00000000818.
GeneID361791.
KEGGrno:361791.
UCSCRGD:1302966. rat.

Organism-specific databases

CTD11270.
RGD1302966. Nrm.

Phylogenomic databases

eggNOGNOG87490.
GeneTreeENSGT00390000008146.
HOGENOMHOG000039993.
HOVERGENHBG102998.
InParanoidQ6MG14.
OMAHPLMLGF.
OrthoDBEOG7S7SFS.
PhylomeDBQ6MG14.
TreeFamTF324853.

Gene expression databases

GenevestigatorQ6MG14.

Family and domain databases

ProtoNetSearch...

Other

NextBio677619.
PROQ6MG14.

Entry information

Entry nameNRM_RAT
AccessionPrimary (citable) accession number: Q6MG14
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families