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Q6MG14

- NRM_RAT

UniProt

Q6MG14 - NRM_RAT

Protein

Nurim

Gene

Nrm

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nurim
    Alternative name(s):
    Nuclear envelope membrane protein
    Nuclear rim protein
    Gene namesi
    Name:Nrm
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 20

    Organism-specific databases

    RGDi1302966. Nrm.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. nuclear envelope Source: UniProtKB
    3. nuclear inner membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Membrane, Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 262262NurimPRO_0000299400Add
    BLAST

    Proteomic databases

    PaxDbiQ6MG14.

    Expressioni

    Gene expression databases

    GenevestigatoriQ6MG14.

    Interactioni

    Protein-protein interaction databases

    BioGridi262960. 1 interaction.
    STRINGi10116.ENSRNOP00000001085.

    Structurei

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 44NuclearSequence Analysis
    Topological domaini29 – 5830Perinuclear spaceSequence AnalysisAdd
    BLAST
    Topological domaini81 – 9717NuclearSequence AnalysisAdd
    BLAST
    Topological domaini115 – 13319Perinuclear spaceSequence AnalysisAdd
    BLAST
    Topological domaini165 – 19127NuclearSequence AnalysisAdd
    BLAST
    Topological domaini211 – 2166Perinuclear spaceSequence Analysis
    Topological domaini235 – 26228NuclearSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei5 – 2824HelicalSequence AnalysisAdd
    BLAST
    Transmembranei59 – 8022HelicalSequence AnalysisAdd
    BLAST
    Transmembranei98 – 11417HelicalSequence AnalysisAdd
    BLAST
    Transmembranei134 – 16431HelicalSequence AnalysisAdd
    BLAST
    Transmembranei192 – 21019HelicalSequence AnalysisAdd
    BLAST
    Transmembranei217 – 23418HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi67 – 726Poly-Leu
    Compositional biasi139 – 253115Leu-richAdd
    BLAST

    Sequence similaritiesi

    Belongs to the nurim family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG87490.
    GeneTreeiENSGT00390000008146.
    HOGENOMiHOG000039993.
    HOVERGENiHBG102998.
    InParanoidiQ6MG14.
    OMAiVYLGLAH.
    OrthoDBiEOG7S7SFS.
    PhylomeDBiQ6MG14.
    TreeFamiTF324853.

    Sequencei

    Sequence statusi: Complete.

    Q6MG14-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPALLLVPA ALASFVLAFG TGVEFVRFTS LRPLLGGIPE SGGPDARHGW    50
    LAALQDRSIL ASLAWDLCLL LLFVVQHSLM ATEAVKAWTS RYFGVLQRSL 100
    YVACTALALQ LVMRYWEATP RGPVLWEARA EPWATWVPLL CFVLHVVSWL 150
    LIFSILLVFD YAELMGLKQV YYHVLGLGEP LSLKSPRALR LFSHLRHPVC 200
    VELLTVLWVV PTLGTDRLLL ALLFTLYLGL AHGLDQQDLR YLRSQLQRKL 250
    QLLSRPQDGE AE 262
    Length:262
    Mass (Da):29,382
    Last modified:July 5, 2004 - v1
    Checksum:iFEAC40DA59359772
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX883048 Genomic DNA. Translation: CAE84033.1.
    RefSeqiNP_997673.1. NM_212508.2.
    UniGeneiRn.38521.

    Genome annotation databases

    EnsembliENSRNOT00000001085; ENSRNOP00000001085; ENSRNOG00000000818.
    GeneIDi361791.
    KEGGirno:361791.
    UCSCiRGD:1302966. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX883048 Genomic DNA. Translation: CAE84033.1 .
    RefSeqi NP_997673.1. NM_212508.2.
    UniGenei Rn.38521.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 262960. 1 interaction.
    STRINGi 10116.ENSRNOP00000001085.

    Proteomic databases

    PaxDbi Q6MG14.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000001085 ; ENSRNOP00000001085 ; ENSRNOG00000000818 .
    GeneIDi 361791.
    KEGGi rno:361791.
    UCSCi RGD:1302966. rat.

    Organism-specific databases

    CTDi 11270.
    RGDi 1302966. Nrm.

    Phylogenomic databases

    eggNOGi NOG87490.
    GeneTreei ENSGT00390000008146.
    HOGENOMi HOG000039993.
    HOVERGENi HBG102998.
    InParanoidi Q6MG14.
    OMAi VYLGLAH.
    OrthoDBi EOG7S7SFS.
    PhylomeDBi Q6MG14.
    TreeFami TF324853.

    Miscellaneous databases

    NextBioi 677619.
    PROi Q6MG14.

    Gene expression databases

    Genevestigatori Q6MG14.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The genomic sequence and comparative analysis of the rat major histocompatibility complex."
      Hurt P., Walter L., Sudbrak R., Klages S., Mueller I., Shiina T., Inoko H., Lehrach H., Guenther E., Reinhardt R., Himmelbauer H.
      Genome Res. 14:631-639(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown Norway.

    Entry informationi

    Entry nameiNRM_RAT
    AccessioniPrimary (citable) accession number: Q6MG14
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 11, 2007
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3