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Protein

Superoxide dismutase

Gene

sodM

Organism
Protochlamydia amoebophila (strain UWE25)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi33Divalent metal cationUniRule annotation1
Metal bindingi81Divalent metal cationUniRule annotation1
Metal bindingi168Divalent metal cationUniRule annotation1
Metal bindingi172Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodMImported
Ordered Locus Names:pc0270Imported
OrganismiProtochlamydia amoebophila (strain UWE25)Imported
Taxonomic identifieri264201 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeParachlamydialesParachlamydiaceaeCandidatus Protochlamydia
Proteomesi
  • UP000000529 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264201.pc0270.

Structurei

3D structure databases

ProteinModelPortaliQ6MEK5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 89Sod_Fe_NInterPro annotationAdd BLAST82
Domaini99 – 201Sod_Fe_CInterPro annotationAdd BLAST103

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013583.
KOiK04564.
OMAiKWGSFDK.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6MEK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNQQKSQAYK LPDLSYDFNA LEPVISAEIM SLHYTKHHQT YVTNLNKALE
60 70 80 90 100
QYLEAEANND LSTMIALQSV IKFNGGGHVN HSIFWTNLAP KNKAGGMAPE
110 120 130 140 150
GILADAINKE FGSLQTLIEQ LSAKAIAIQG SGWGWLGYDK AKDRLTLATC
160 170 180 190 200
ENQDPLSTKG LIPLLGIDVW EHAYYLQYKN VRADYVKNIW NIINWKNVAE

RYQAAKTK
Length:208
Mass (Da):23,388
Last modified:July 5, 2004 - v1
Checksum:i63B45FC69E6FA840
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX908798 Genomic DNA. Translation: CAF22994.1.
RefSeqiWP_011174820.1. NC_005861.1.

Genome annotation databases

EnsemblBacteriaiCAF22994; CAF22994; pc0270.
KEGGipcu:pc0270.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ6MEK5_PARUW
AccessioniPrimary (citable) accession number: Q6MEK5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 7, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported