Q6M126 (Q6M126_METMP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-directed RNA polymerase subunit F EMBL CAF29648.1
EC=2.7.7.6 EMBL CAF29648.1

Gene names

Name:	rpoF EMBL CAF29648.1
Ordered Locus Names:	MMP0092

Organism

Methanococcus maripaludis (strain S2 / LL) [Complete proteome] [HAMAP]

Taxonomic identifier

267377 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	107 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase EMBL CAF29648.1
Molecular function	Nucleotidyltransferase EMBL CAF29648.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6M126 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 71A01677D4483AF0	FASTA	107	12,381
	10 20 30 40 50 60 MIGKEIISEK YTTIAHATEI MDERADFDEL SYEHGCSLDY LRKFSTISKD DADAMFEQLV 70 80 90 100 NLGLTEKMAV KIIDLLPETE EDLKIIFYRV DVPENKDEIL EVVSKFK

References

[1]

"Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis." Hendrickson E.L., Kaul R., Zhou Y., Bovee D., Chapman P., Chung J., Conway de Macario E., Dodsworth J.A., Gillett W., Graham D.E., Hackett M., Haydock A.K., Kang A., Land M.L., Levy R., Lie T.J., Major T.A., Moore B.C. , Porat I., Palmeiri A., Rouse G., Saenphimmachak C., Soell D., Van Dien S., Wang T., Whitman W.B., Xia Q., Zhang Y., Larimer F.W., Olson M.V., Leigh J.A. J. Bacteriol. 186:6956-6969(2004) [PubMed: 15466049] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S2 / LL.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX950229 Genomic DNA. Translation: CAF29648.1.
RefSeq	NP_987212.1. NC_005791.1.
3D structure databases
ProteinModelPortal	Q6M126.
SMR	Q6M126. Positions 1-106.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2761852.
GenomeReviews	Gene locus MMP0092 in contig BX950229_GR.
KEGG	mmp:MMP0092.
NMPDR	fig|267377.1.peg.92.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG321515.
OMA	CALDYLQ.
ProtClustDB	PRK14981.
Family and domain databases
InterPro	IPR010997. HRDC-like. IPR015906. HRDC-like_sub1. IPR015907. HRDC-like_sub2. IPR010924. RNA_pol_F_arc. IPR005574. RNA_pol_II_Rpb4. [Graphical view]
Gene3D	G3DSA:1.10.150.80. HRDC-like_sub1. 1 hit. G3DSA:1.10.287.420. HRDC-like_sub2. 1 hit.
KO	K03051.
Pfam	PF03874. RNA_pol_Rpb4. 1 hit. [Graphical view]
PIRSF	PIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAM	SSF47819. HRDC_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6M126_METMP

Accession

Primary (citable) accession number: Q6M126

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	November 16, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)