Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

MMP0487

Organism
Methanococcus maripaludis (strain S2 / LL)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:MMP0487Imported
OrganismiMethanococcus maripaludis (strain S2 / LL)Imported
Taxonomic identifieri267377 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000000590 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 30HelicalSequence analysisAdd BLAST19
Transmembranei295 – 314HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi267377.MMP0487.

Structurei

3D structure databases

ProteinModelPortaliQ6LZY6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini315 – 367HAMPInterPro annotationAdd BLAST53
Domaini443 – 700Methyl-accepting transducerInterPro annotationAdd BLAST258

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili398 – 457Sequence analysisAdd BLAST60
Coiled coili462 – 496Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000254166.
KOiK03406.
OMAiITEEMQI.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033463. sCache_3.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17202. sCache_3_3. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6LZY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKISFKKIGT KLLIFMILCA IIPLMVVGGV STNKITEEMQ IQGDNSVNDN
60 70 80 90 100
LNIFQESIEN VIVEFETTTS YTASLDTFSE LLVNDDKEVL YDFAEKMKKS
110 120 130 140 150
SEVDLVAFTD KNGNIISSSD NVQTNLKPVI SKLLSNEVQS SFEIISGSEA
160 170 180 190 200
SKYSDYKVNN INDALAICVV APVYHSGELV GTVTLVDIVN NDDYWVDSLK
210 220 230 240 250
ERTGNEATIF LKNVRISTTV QTNGQDATGT KCSDEVYNII TNHQDYVGTA
260 270 280 290 300
NVLGSEYITK YSPIEDKDGN VVGIIFTGIP KAPFVAVITD TRNEIIIISL
310 320 330 340 350
LGLLLSILIA LYTGRKITKP IEELKKGTEE FGNGNYDYKT TVKTGDELQE
360 370 380 390 400
LSDSFNKMAE NVKNLMKTMD MDKVELATLL TNVSDVMNRV AKGDFTARAD
410 420 430 440 450
ESRENNNLEK AINTAVSNVA DLIKELREEV ELLNIQIQKV EDELKGAEET
460 470 480 490 500
ATQVAEAATQ VAEAASDQSA KLQESSEELE NTYEGAKEVY SAAEETVKSS
510 520 530 540 550
EEIKENSETG VEKVENAISR MQSITNVIDE LGKSIKMLGE DGKKINEVTG
560 570 580 590 600
LIKDIAEQTG LLALNASIEA ARAGDAGKGF AVVASEIKSL AEEIKKSVED
610 620 630 640 650
INHTIEGVNK RIDDTIDLGL KGKDEVDKGV IAIDEVNDAL LKIKESVNES
660 670 680 690 700
AVKINGIKHG AQNASENTEG ALKNAQEIAA LSEEFTATAE EVTASTEELN
710 720
SIIEEIRGIA EEVTQVAERV TKKSSQFKI
Length:729
Mass (Da):79,511
Last modified:July 5, 2004 - v1
Checksum:i4F2DC66E6B88529E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950229 Genomic DNA. Translation: CAF30043.1.
RefSeqiWP_011170431.1. NC_005791.1.

Genome annotation databases

EnsemblBacteriaiCAF30043; CAF30043; MMP0487.
GeneIDi2761059.
KEGGimmp:MMP0487.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950229 Genomic DNA. Translation: CAF30043.1.
RefSeqiWP_011170431.1. NC_005791.1.

3D structure databases

ProteinModelPortaliQ6LZY6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi267377.MMP0487.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAF30043; CAF30043; MMP0487.
GeneIDi2761059.
KEGGimmp:MMP0487.

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000254166.
KOiK03406.
OMAiITEEMQI.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033463. sCache_3.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17202. sCache_3_3. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6LZY6_METMP
AccessioniPrimary (citable) accession number: Q6LZY6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.