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Protein

UPF0147 protein MMP1188

Gene

MMP1188

Organism
Methanococcus maripaludis (strain S2 / LL)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciMMAR267377:GJ77-1219-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0147 protein MMP1188UniRule annotation
Gene namesi
Ordered Locus Names:MMP1188Imported
OrganismiMethanococcus maripaludis (strain S2 / LL)Imported
Taxonomic identifieri267377 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000000590 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi267377.MMP1188.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2QZGX-ray2.09A/B/C/D1-91[»]
ProteinModelPortaliQ6LY05.
SMRiQ6LY05. Positions 2-91.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ6LY05.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0147 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04308. Archaea.
COG1698. LUCA.
HOGENOMiHOG000230151.
KOiK09721.
OMAiANDNSVP.

Family and domain databases

Gene3Di1.20.1440.50. 1 hit.
HAMAPiMF_00342. UPF0147.
InterProiIPR023130. Ta0600-like_domain.
IPR005354. UPF0147.
[Graphical view]
PfamiPF03685. UPF0147. 1 hit.
[Graphical view]
ProDomiPD029943. UPF0147. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q6LY05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSAKKLSPA DKLKNISSML EEIVEDTTVP RNIRAAADNA KNALHNEEQE
60 70 80 90
LIVRSATAIQ YLDDISEDPN MPIHTRTQIW GIVSELETIK N
Length:91
Mass (Da):10,234
Last modified:July 5, 2004 - v1
Checksum:iD8DB7BA78DFEE9DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950229 Genomic DNA. Translation: CAF30744.1.
RefSeqiWP_011171132.1. NC_005791.1.

Genome annotation databases

EnsemblBacteriaiCAF30744; CAF30744; MMP1188.
GeneIDi2761332.
KEGGimmp:MMP1188.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950229 Genomic DNA. Translation: CAF30744.1.
RefSeqiWP_011171132.1. NC_005791.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2QZGX-ray2.09A/B/C/D1-91[»]
ProteinModelPortaliQ6LY05.
SMRiQ6LY05. Positions 2-91.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi267377.MMP1188.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAF30744; CAF30744; MMP1188.
GeneIDi2761332.
KEGGimmp:MMP1188.

Phylogenomic databases

eggNOGiarCOG04308. Archaea.
COG1698. LUCA.
HOGENOMiHOG000230151.
KOiK09721.
OMAiANDNSVP.

Enzyme and pathway databases

BioCyciMMAR267377:GJ77-1219-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ6LY05.

Family and domain databases

Gene3Di1.20.1440.50. 1 hit.
HAMAPiMF_00342. UPF0147.
InterProiIPR023130. Ta0600-like_domain.
IPR005354. UPF0147.
[Graphical view]
PfamiPF03685. UPF0147. 1 hit.
[Graphical view]
ProDomiPD029943. UPF0147. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S2 / LLImported.
  2. "Crystal structure of MMP1188, unknown function protein."
    Chang C., Volkart L., Freeman L., Joachimiak A.
    Submitted (AUG-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.09 ANGSTROMS).

Entry informationi

Entry nameiQ6LY05_METMP
AccessioniPrimary (citable) accession number: Q6LY05
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 16, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.