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Protein

Ribosome biogenesis protein Nop10

Gene

nop10

Organism
Methanococcus maripaludis (strain S2 / LL)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Biological processi

Ribosome biogenesis, rRNA processing

Enzyme and pathway databases

BioCyciMMAR267377:GJ77-1756-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome biogenesis protein Nop10
Gene namesi
Name:nop10
Ordered Locus Names:MMP1706
OrganismiMethanococcus maripaludis (strain S2 / LL)
Taxonomic identifieri267377 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000000590 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 5151Ribosome biogenesis protein Nop10PRO_0000149020Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi267377.MMP1706.

Structurei

3D structure databases

ProteinModelPortaliQ6LWK3.
SMRiQ6LWK3. Positions 1-49.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NOP10 family.Curated

Phylogenomic databases

eggNOGiarCOG00906. Archaea.
COG2260. LUCA.
HOGENOMiHOG000224954.
KOiK11130.
OMAiFRIRKCP.

Family and domain databases

HAMAPiMF_00803. Nop10.
InterProiIPR007264. H/ACA_rnp_Nop10.
IPR023532. Nop10_arc-typ.
[Graphical view]
PANTHERiPTHR13305. PTHR13305. 1 hit.
PfamiPF04135. Nop10p. 1 hit.
[Graphical view]
SUPFAMiSSF144210. SSF144210. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6LWK3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMKKCPKCG KYTLKDFCSE CNEKSVTVKP PRFSPVDKYG KYRRALKKAK

M
Length:51
Mass (Da):5,977
Last modified:July 5, 2004 - v1
Checksum:i67FA27A74F0EA707
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950229 Genomic DNA. Translation: CAF31262.1.
RefSeqiWP_011171650.1. NC_005791.1.

Genome annotation databases

EnsemblBacteriaiCAF31262; CAF31262; MMP1706.
GeneIDi2761368.
KEGGimmp:MMP1706.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950229 Genomic DNA. Translation: CAF31262.1.
RefSeqiWP_011171650.1. NC_005791.1.

3D structure databases

ProteinModelPortaliQ6LWK3.
SMRiQ6LWK3. Positions 1-49.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi267377.MMP1706.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAF31262; CAF31262; MMP1706.
GeneIDi2761368.
KEGGimmp:MMP1706.

Phylogenomic databases

eggNOGiarCOG00906. Archaea.
COG2260. LUCA.
HOGENOMiHOG000224954.
KOiK11130.
OMAiFRIRKCP.

Enzyme and pathway databases

BioCyciMMAR267377:GJ77-1756-MONOMER.

Family and domain databases

HAMAPiMF_00803. Nop10.
InterProiIPR007264. H/ACA_rnp_Nop10.
IPR023532. Nop10_arc-typ.
[Graphical view]
PANTHERiPTHR13305. PTHR13305. 1 hit.
PfamiPF04135. Nop10p. 1 hit.
[Graphical view]
SUPFAMiSSF144210. SSF144210. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S2 / LL.

Entry informationi

Entry nameiNOP10_METMP
AccessioniPrimary (citable) accession number: Q6LWK3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: July 5, 2004
Last modified: February 17, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.