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Q6LUH1

- DEOD1_PHOPR

UniProt

Q6LUH1 - DEOD1_PHOPR

Protein

Purine nucleoside phosphorylase DeoD-type 1

Gene

deoD1

Organism
Photobacterium profundum (Photobacterium sp. (strain SS9))
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
    Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. purine nucleoside metabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Purine nucleoside phosphorylase DeoD-type 1UniRule annotation (EC:2.4.2.1UniRule annotation)
    Short name:
    PNP 1UniRule annotation
    Gene namesi
    Name:deoD1UniRule annotation
    Ordered Locus Names:PBPRA0633
    OrganismiPhotobacterium profundum (Photobacterium sp. (strain SS9))
    Taxonomic identifieri74109 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
    ProteomesiUP000000593: Chromosome 1

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 241241Purine nucleoside phosphorylase DeoD-type 1PRO_0000063151Add
    BLAST

    Proteomic databases

    PRIDEiQ6LUH1.

    Interactioni

    Subunit structurei

    Homohexamer.UniRule annotation

    Protein-protein interaction databases

    STRINGi298386.PBPRA0633.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6LUH1.
    SMRiQ6LUH1. Positions 2-237.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PNP/UDP phosphorylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0813.
    HOGENOMiHOG000274896.
    KOiK03784.
    OMAiRQTTFSE.
    OrthoDBiEOG6BKJC5.

    Family and domain databases

    Gene3Di3.40.50.1580. 1 hit.
    HAMAPiMF_01627. Pur_nucleosid_phosp.
    InterProiIPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view]
    PANTHERiPTHR21234. PTHR21234. 1 hit.
    PfamiPF01048. PNP_UDP_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF53167. SSF53167. 1 hit.
    TIGRFAMsiTIGR00107. deoD. 1 hit.
    PROSITEiPS01232. PNP_UDP_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6LUH1-1 [UniParc]FASTAAdd to Basket

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    MATPHINAEM GDFADVVLMP GDPLRAKYIA ETFLQDVKEV CNVRSMFGYT    50
    GTYKGRKISV MGHGMGIPSC SIYATELIKD FGVKKIIRVG SCGAVRDDVK 100
    LRDVVIGMGA STDSKVNRIR FGGHDFAAIA DFGMVQNAVD AAKAKGIPVK 150
    VGNIFSADLF YNPDFEFFKT MDKYGIVGVE MEAAGIYGVA AEFGAKALTI 200
    CTVSDHILRG EATTSEERQL TFNEMMEIAL ESVLLGDADE A 241
    Length:241
    Mass (Da):26,036
    Last modified:July 5, 2004 - v1
    Checksum:i392EDEB2F948B130
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378664 Genomic DNA. Translation: CAG19054.1.
    RefSeqiYP_128856.1. NC_006370.1.

    Genome annotation databases

    EnsemblBacteriaiCAG19054; CAG19054; PBPRA0633.
    GeneIDi3124092.
    KEGGippr:PBPRA0633.
    PATRICi22931963. VBIPhoPro109272_0711.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378664 Genomic DNA. Translation: CAG19054.1 .
    RefSeqi YP_128856.1. NC_006370.1.

    3D structure databases

    ProteinModelPortali Q6LUH1.
    SMRi Q6LUH1. Positions 2-237.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 298386.PBPRA0633.

    Proteomic databases

    PRIDEi Q6LUH1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAG19054 ; CAG19054 ; PBPRA0633 .
    GeneIDi 3124092.
    KEGGi ppr:PBPRA0633.
    PATRICi 22931963. VBIPhoPro109272_0711.

    Phylogenomic databases

    eggNOGi COG0813.
    HOGENOMi HOG000274896.
    KOi K03784.
    OMAi RQTTFSE.
    OrthoDBi EOG6BKJC5.

    Family and domain databases

    Gene3Di 3.40.50.1580. 1 hit.
    HAMAPi MF_01627. Pur_nucleosid_phosp.
    InterProi IPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view ]
    PANTHERi PTHR21234. PTHR21234. 1 hit.
    Pfami PF01048. PNP_UDP_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53167. SSF53167. 1 hit.
    TIGRFAMsi TIGR00107. deoD. 1 hit.
    PROSITEi PS01232. PNP_UDP_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SS9.

    Entry informationi

    Entry nameiDEOD1_PHOPR
    AccessioniPrimary (citable) accession number: Q6LUH1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 10, 2006
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3