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Q6LSE3 (Q6LSE3_PHOPR) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Y0404 EMBL CAG19783.1
Ordered Locus Names:PBPRA1372 EMBL CAG19783.1
OrganismPhotobacterium profundum (Photobacterium sp. (strain SS9)) [Complete proteome] [HAMAP] EMBL CAG19783.1
Taxonomic identifier74109 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium

Protein attributes

Sequence length566 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

FAD By similarity.

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU003891

Sequences

Sequence LengthMass (Da)Tools
Q6LSE3 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: CE12154711894B5C

FASTA56662,425
        10         20         30         40         50         60 
MTSWLETDVV IIGGGATGTG IMRDCALRGI KCILVERDDL ASGTTGRNHG LLHSGARYAV 

        70         80         90        100        110        120 
TDEESARECI QENRILKNIA RHCVEDTQGL FISLPDDDLD FQKSFLTACG RADIDVEQLS 

       130        140        150        160        170        180 
PEEALRLEPN CNPNLIGAVK VPDGTIDPFR LASSNVLDAV EHGARLFNHT HVTGLIREGH 

       190        200        210        220        230        240 
AVRGVRCLNM KTGEHFDIRS KQVINAAGIW GQQICEYGDL NIKMFPAKGS LLILDYRINN 

       250        260        270        280        290        300 
LVINRCRKPS DADILVPGDT ISLIGTTSER IDYDKIDDLH VTSREIDVLL EEGAKLAPIM 

       310        320        330        340        350        360 
ANTRVLRAYA GVRPLVAVDG DTSGRNISRG IVLLDHAERD GMDGFITITG GKLMTYRMMA 

       370        380        390        400        410        420 
EWATDLVAKK LGNTQPCITH TKPLPGSEQA QKKVKHTASL AKPIYQSAYY RHGERAEKFL 

       430        440        450        460        470        480 
KNDKKSQAVI CECEMVTSGE VEYAIKELDV HNLVDLRRRT RVGMGPCQGE LCSYRAAGLF 

       490        500        510        520        530        540 
SEYGQSSGTE ASHLLSDFLE ERWKGIKPVF WGDALREAEF TYWIYEGLFG VSDIPDSDLP 

       550        560 
SLPTLNLDTD NSTATQTNEN KSEVAS 

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References

[1]"Life at depth: Photobacterium profundum genome sequence and expression analysis."
Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M., Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C., Bartlett D.H., Valle G.
Science 307:1459-1461(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SS9.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR378667 Genomic DNA. Translation: CAG19783.1.
RefSeqYP_129585.1. NC_006370.1.

3D structure databases

ProteinModelPortalQ6LSE3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING298386.PBPRA1372.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG19783; CAG19783; PBPRA1372.
GeneID3124866.
KEGGppr:PBPRA1372.
PATRIC22933553. VBIPhoPro109272_1491.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000004814.
KOK00111.
OMAQIDNMEV.
OrthoDBEOG651SR7.
ProtClustDBPRK11101.

Family and domain databases

InterProIPR007419. BFD-like_2Fe2S-bd_dom.
IPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
IPR017752. G3P_DH_GlpA_su.
[Graphical view]
PfamPF01266. DAO. 1 hit.
PF04324. Fer2_BFD. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
TIGRFAMsTIGR03377. glycerol3P_GlpA. 1 hit.
PROSITEPS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6LSE3_PHOPR
AccessionPrimary (citable) accession number: Q6LSE3
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 13, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)