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Q6LS17

- Q6LS17_PHOPR

UniProt

Q6LS17 - Q6LS17_PHOPR

Protein
Submitted name:

Hypothetical Glutamate decarboxylase

Gene

SO1769

Organism
Photobacterium profundum (Photobacterium sp. (strain SS9))
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciPPRO298386-WGS:GSSB-1500-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Hypothetical Glutamate decarboxylaseImported
    Gene namesi
    Name:SO1769Imported
    Ordered Locus Names:PBPRA1498Imported
    OrganismiPhotobacterium profundum (Photobacterium sp. (strain SS9))Imported
    Taxonomic identifieri74109 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
    ProteomesiUP000000593: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi298386.PBPRA1498.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6LS17.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiARYFRQP.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6LS17-1 [UniParc]FASTAAdd to Basket

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    MAVDNRKADA TLESLHRIFT VPEAPESTLG LIEQKISQNL NEFLGTHIAA    50
    REKPLIEIEK DFSSAEIPEN PSFVSDHTQF LLTKLVAQSV HTSAPSFIGH 100
    MTSALPYFLM PLSKIMIGLN QNLVKIETSK AFTPLERQVL GMMHNLIFNE 150
    ETSFYQQWMH SADHSLGAFC SGGTIANITA LWVARNNVLK PDGEFKGVAN 200
    EGLFRAMKHY GYDDLAILVS ERGHYSLKKA ADVLGIGRDC LIPIKTDDNN 250
    RIRVDDLTAT LQSLKEKNIK PFAIIGVAGT TETGNIDPLD ELADIAQAHD 300
    CHFHVDAAWG GATLMSNKYR SLLKGIERAD SITIDAHKQL YVPMGAGMVI 350
    FKNPALMTSI EHHAEYILRK GSKDLGSHTL EGSRSGMAML LFASLNIISR 400
    QGYEMLINNS IDKAKHFANM VKQDPDFELV TEPELCLLTY RYVPAETQQA 450
    LTIANAEDKH LLHDALNDLT KFIQKRQRES GKSFVSRTRL TPEKWDHKIT 500
    TVFRVVLANP LTTDNILQDV LIEQKELAKE SVHSLPRLFT LTKRILANN 549
    Length:549
    Mass (Da):61,308
    Last modified:July 5, 2004 - v1
    Checksum:iA2B793E026ADF5A6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378667 Genomic DNA. Translation: CAG19909.1.
    RefSeqiYP_129711.1. NC_006370.1.

    Genome annotation databases

    EnsemblBacteriaiCAG19909; CAG19909; PBPRA1498.
    GeneIDi3122054.
    KEGGippr:PBPRA1498.
    PATRICi22933838. VBIPhoPro109272_1633.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378667 Genomic DNA. Translation: CAG19909.1 .
    RefSeqi YP_129711.1. NC_006370.1.

    3D structure databases

    ProteinModelPortali Q6LS17.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 298386.PBPRA1498.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAG19909 ; CAG19909 ; PBPRA1498 .
    GeneIDi 3122054.
    KEGGi ppr:PBPRA1498.
    PATRICi 22933838. VBIPhoPro109272_1633.

    Phylogenomic databases

    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi ARYFRQP.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci PPRO298386-WGS:GSSB-1500-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SS9Imported.

    Entry informationi

    Entry nameiQ6LS17_PHOPR
    AccessioniPrimary (citable) accession number: Q6LS17
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3