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Protein
Submitted name:

Hypothetical Glutamate decarboxylase

Gene

SO1769

Organism
Photobacterium profundum (Photobacterium sp. (strain SS9))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPPRO298386-WGS:GSSB-1500-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Hypothetical Glutamate decarboxylaseImported
Gene namesi
Name:SO1769Imported
Ordered Locus Names:PBPRA1498Imported
OrganismiPhotobacterium profundum (Photobacterium sp. (strain SS9))Imported
Taxonomic identifieri74109 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
ProteomesiUP000000593 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi298386.PBPRA1498.

Structurei

3D structure databases

ProteinModelPortaliQ6LS17.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000282553.
KOiK01580.
OMAiEGTAMIS.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6LS17-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVDNRKADA TLESLHRIFT VPEAPESTLG LIEQKISQNL NEFLGTHIAA
60 70 80 90 100
REKPLIEIEK DFSSAEIPEN PSFVSDHTQF LLTKLVAQSV HTSAPSFIGH
110 120 130 140 150
MTSALPYFLM PLSKIMIGLN QNLVKIETSK AFTPLERQVL GMMHNLIFNE
160 170 180 190 200
ETSFYQQWMH SADHSLGAFC SGGTIANITA LWVARNNVLK PDGEFKGVAN
210 220 230 240 250
EGLFRAMKHY GYDDLAILVS ERGHYSLKKA ADVLGIGRDC LIPIKTDDNN
260 270 280 290 300
RIRVDDLTAT LQSLKEKNIK PFAIIGVAGT TETGNIDPLD ELADIAQAHD
310 320 330 340 350
CHFHVDAAWG GATLMSNKYR SLLKGIERAD SITIDAHKQL YVPMGAGMVI
360 370 380 390 400
FKNPALMTSI EHHAEYILRK GSKDLGSHTL EGSRSGMAML LFASLNIISR
410 420 430 440 450
QGYEMLINNS IDKAKHFANM VKQDPDFELV TEPELCLLTY RYVPAETQQA
460 470 480 490 500
LTIANAEDKH LLHDALNDLT KFIQKRQRES GKSFVSRTRL TPEKWDHKIT
510 520 530 540
TVFRVVLANP LTTDNILQDV LIEQKELAKE SVHSLPRLFT LTKRILANN
Length:549
Mass (Da):61,308
Last modified:July 5, 2004 - v1
Checksum:iA2B793E026ADF5A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR378667 Genomic DNA. Translation: CAG19909.1.

Genome annotation databases

EnsemblBacteriaiCAG19909; CAG19909; PBPRA1498.
KEGGippr:PBPRA1498.
PATRICi22933838. VBIPhoPro109272_1633.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR378667 Genomic DNA. Translation: CAG19909.1.

3D structure databases

ProteinModelPortaliQ6LS17.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi298386.PBPRA1498.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG19909; CAG19909; PBPRA1498.
KEGGippr:PBPRA1498.
PATRICi22933838. VBIPhoPro109272_1633.

Phylogenomic databases

HOGENOMiHOG000282553.
KOiK01580.
OMAiEGTAMIS.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciPPRO298386-WGS:GSSB-1500-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SS9Imported.

Entry informationi

Entry nameiQ6LS17_PHOPR
AccessioniPrimary (citable) accession number: Q6LS17
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 22, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.