Q6LPX9 (ALLC_PHOPR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable allantoicase
EC=3.5.3.4

Alternative name(s):
Allantoate amidinohydrolase

Gene names

Name:	alc
Ordered Locus Names:	PBPRA2261

Organism

Photobacterium profundum (Photobacterium sp. (strain SS9)) [Complete proteome] [HAMAP]

Taxonomic identifier

74109 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Photobacterium

Protein attributes

Sequence length	330 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813
Pathway	Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813
Sequence similarities	Belongs to the allantoicase family.

Ontologies

Keywords
Biological process	Purine metabolism
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	purine base metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	allantoicase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 330	330	Probable allantoicase HAMAP MF_00813		PRO_0000205922

Sequences

	Sequence		Length	Mass (Da)
	Q6LPX9 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: E8A8F4E9BAD5E6E5	FASTA	330	36,577
	10 20 30 40 50 60 MEKALNFEQY VNLADPKLGA EAIFATDDFF ADKSRLIRTE AAEWKEDLYD DNGKWMDGWE 70 80 90 100 110 120 SRRKRSEGYD FCVVRLGLAG TIAGLDIDTS FFTGNFPPSA SVDACYSPDG EPSDSTEWQE 130 140 150 160 170 180 ILSSQSLQGD SHHLHALDNE QVFTHVRLNI YPDGGVARLR VYGRPSVNWD QIGIDQEVDL 190 200 210 220 230 240 AAVVNGGRAL ACSDEHFGKK SNILGPGRGE NMGDGWETAR RRTPGNDWVI VALGRPGKIG 250 260 270 280 290 300 KVVVDTAHFK GNFPDSCSIQ AAYVQGGTDD QVETQSLFWR ELMPSQKLSA HNIQEFVEQV 310 320 330 NDLGAVTHVR LNIFPDGGIS RLRLFGFKSE

References

[1]

"Life at depth: Photobacterium profundum genome sequence and expression analysis." Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M., Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C., Bartlett D.H., Valle G. Science 307:1459-1461(2005) [PubMed: 15746425] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SS9.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR378670 Genomic DNA. Translation: CAG20647.1.
RefSeq	YP_130449.1. NC_006370.1.
3D structure databases
ProteinModelPortal	Q6LPX9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3125523.
GenomeReviews	Gene locus PBPRA2261 in contig CR354531_GR.
KEGG	ppr:PBPRA2261.
NMPDR	fig|298386.1.peg.4519.
PATRIC	22935478. VBIPhoPro109272_2433.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG480577.
OMA	ELKSDDW.
PhylomeDB	Q6LPX9.
ProtClustDB	PRK13257.
Enzyme and pathway databases
BioCyc	PPRO298386:PBPRA2261-MONOMER.
Family and domain databases
HAMAP	MF_00813. Allantoicase. [Tree]
InterPro	IPR005164. Allantoicase. IPR015908. Allantoicase_dom. IPR008979. Galactose-bd-like. [Graphical view]
KO	K01477.
PANTHER	PTHR12045. Allantoicase. 1 hit.
Pfam	PF03561. Allantoicase. 2 hits. [Graphical view]
PIRSF	PIRSF016516. Allantoicase. 1 hit.
SUPFAM	SSF49785. Gal_bind_like. 2 hits.
TIGRFAMs	TIGR02961. Allantoicase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ALLC_PHOPR

Accession

Primary (citable) accession number: Q6LPX9

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 13, 2005
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program