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Protein
Submitted name:

Putative aspartate aminotransferase

Gene

YPO1410

Organism
Photobacterium profundum (strain SS9)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative aspartate aminotransferaseImported
Gene namesi
Name:YPO1410Imported
Ordered Locus Names:PBPRA2341Imported
OrganismiPhotobacterium profundum (strain SS9)Imported
Taxonomic identifieri298386 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
Proteomesi
  • UP000000593 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi298386.PBPRA2341.

Structurei

3D structure databases

ProteinModelPortaliQ6LPQ0.
SMRiQ6LPQ0. Positions 1-396.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 391365Aminotran_1_2InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili297 – 32428Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6LPQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFEKITAAPA DPILGLTDEF KNDTRPEKIN LGVGIYKDES GNTPVLATVK
60 70 80 90 100
KAEAILLEKE TTKSYLGIPG TAEYGLAVQQ LLFGANATII SDKRAQTAQA
110 120 130 140 150
PGGTGALRVA AEFIKRQLGD VKVWISNPTW ANHIGVFAAA GLETASYSYY
160 170 180 190 200
NAETKDIDFD AALADLANAN EGDIVLLHGC CHNPTGIDPV EAQWHQLAAL
210 220 230 240 250
CVEKKLLPMF DFAYQGFAVG VEEDAQGLRI FAEQCSELLV ASSFSKNFGL
260 270 280 290 300
YNERVGAFTL VGKNAEQAAT AFSQVKSIAR VIYSNPPAHG AAIVTLILND
310 320 330 340 350
EALRNEWEQE VADMRNRIQE MRTLFVQTLK DCGVDADFSF IERQNGMFSF
360 370 380 390
SGLNKDQVNR LKEEFGIYIV GSGRISVAGM TKNNMLPLCK GIAAVL
Length:396
Mass (Da):42,986
Last modified:July 5, 2004 - v1
Checksum:i29FB38452EB8B205
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR378670 Genomic DNA. Translation: CAG20726.1.
RefSeqiWP_011219014.1. NC_006370.1.

Genome annotation databases

EnsemblBacteriaiCAG20726; CAG20726; PBPRA2341.
KEGGippr:PBPRA2341.
PATRICi22935656. VBIPhoPro109272_2521.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR378670 Genomic DNA. Translation: CAG20726.1.
RefSeqiWP_011219014.1. NC_006370.1.

3D structure databases

ProteinModelPortaliQ6LPQ0.
SMRiQ6LPQ0. Positions 1-396.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi298386.PBPRA2341.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG20726; CAG20726; PBPRA2341.
KEGGippr:PBPRA2341.
PATRICi22935656. VBIPhoPro109272_2521.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1253 / SS9Imported.

Entry informationi

Entry nameiQ6LPQ0_PHOPR
AccessioniPrimary (citable) accession number: Q6LPQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 6, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.