Q6LM80 (Q6LM80_PHOPR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase EMBL CAG21597.1

Gene names

Name:	SYNW1075 EMBL CAG21597.1
Ordered Locus Names:	PBPRA3292

Organism

Photobacterium profundum (Photobacterium sp. (strain SS9)) [Complete proteome] [HAMAP]

Taxonomic identifier

74109 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Photobacterium

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU004504 SAAS SAAS020578
Sequence similarities	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU004075

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020578 Pyruvate EMBL CAG21597.1
Molecular function	Aminotransferase EMBL CAG21597.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6LM80 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 504689A563F7F26A	FASTA	372	40,580
	10 20 30 40 50 60 MTITSFYPPQ RTLMGPGPSD IYPQVLQALS RPTIGHLDPL FVGMMDELKQ LLQYAFQTKN 70 80 90 100 110 120 TFTIAVSAPG SAGMEACFVN LVEPGDKVIV CRNGVFGDRM RENVERCGGK AVVVDNTWGE 130 140 150 160 170 180 PVDPLLVEQA LIDNPDAKVL AFVHAETSTG ALSDAEALAK LARQHDCLTI VDAVTSLGGV 190 200 210 220 230 240 PLLVDEWQLD AVYSGSQKCL SCVPGLSPLT FSQRAIDKIQ ARKTPVQSWF LDQSLVLGYW 250 260 270 280 290 300 SGEGKRTYHH TAPVNSLYAL HEALVLLQNE GLENAWQRHK DAHLELREGL EKLGITFVVD 310 320 330 340 350 360 EASRLPQLNA VYIPDGVDDA LVRKKLLERY NLEIGAGLGA LGGKAWRIGL MGYAARSENV 370 ALCLKALEST LK

References

[1]

"Life at depth: Photobacterium profundum genome sequence and expression analysis." Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M., Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C., Bartlett D.H., Valle G. Science 307:1459-1461(2005) [PubMed: 15746425] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR378673 Genomic DNA. Translation: CAG21597.1.
RefSeq	YP_131399.1. NC_006370.1.
3D structure databases
ProteinModelPortal	Q6LM80.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3124084.
GenomeReviews	Gene locus PBPRA3292 in contig CR354531_GR.
KEGG	ppr:PBPRA3292.
NMPDR	fig|298386.1.peg.5505.
PATRIC	22937645. VBIPhoPro109272_3438.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG700056.
OMA	MRQNVER.
PhylomeDB	Q6LM80.
Enzyme and pathway databases
BioCyc	PPRO298386:PBPRA3292-MONOMER.
Family and domain databases
InterPro	IPR000192. Aminotrans_V/Cys_dSase. IPR020578. Aminotrans_V_PyrdxlP_BS. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR024169. SP_NH2Trfase/AEP_transaminase. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00830.
Pfam	PF00266. Aminotran_5. 1 hit. [Graphical view]
PIRSF	PIRSF000524. SPT. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00595. AA_TRANSFER_CLASS_5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6LM80_PHOPR

Accession

Primary (citable) accession number: Q6LM80

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)