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Protein

Alpha-amylase

Gene

VV20400

Organism
Photobacterium profundum (strain SS9)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:VV20400Imported
Ordered Locus Names:PBPRB0404Imported
OrganismiPhotobacterium profundum (strain SS9)Imported
Taxonomic identifieri298386 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
Proteomesi
  • UP000000593 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi298386.PBPRB0404

Structurei

3D structure databases

ProteinModelPortaliQ6LKA3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 385AamyInterPro annotationAdd BLAST365

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105E54 Bacteria
COG0366 LUCA
HOGENOMiHOG000274290
KOiK01176
OMAiPYCFGQA
OrthoDBiPOG091H0F1O

Family and domain databases

InterProiView protein in InterPro
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

Q6LKA3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSLFNTEYA STLSAPSVAT NVILHAFDWP YSKVTESAKA IADSGYKAIL
60 70 80 90 100
VSPPLKSFHS KDGTQWWQRY QPQDYRVIDN QLGNTNDFRK MAETLNLHDI
110 120 130 140 150
DIYADIVFNH MANESHERND LNYPNSNIIS QYKDKREYFD SIKLFGDLSQ
160 170 180 190 200
PLFTKDDFLS AFPIKDWKDP WQVQHGRISS GGSDPGLPTL KNNKNVVKKQ
210 220 230 240 250
KLYLKALKKI GVKGFRIDAA KHMTLDHIQE LCDEDITEGM HIFGEIITDG
260 270 280 290 300
GATKEEYELF LQPYLEKTTL GAYDFPLFHT VLDVFNKNAS MASLINPYSL
310 320 330 340 350
GSALENQRAI TFAITHDIPN NDVFLDQVMS EENERLAYCY ILGRDGGVPL
360 370 380 390 400
VYTDLDTSGI KSSRDKPRWC DAWNDPILAN MIHFHNIMHC QPMAIIEQTQ
410 420 430 440 450
DLLVFSRGEH GVVAINKGKK AVSYELPIKY SQQNRTEINE IINMEGVKLL
460 470
PPSLGSETGA ILQLPAQSCA MLVS
Length:474
Mass (Da):53,598
Last modified:July 5, 2004 - v1
Checksum:i70615C9B6EAAF22A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR378676 Genomic DNA Translation: CAG22277.1
RefSeqiWP_011220488.1, NC_006371.1

Genome annotation databases

EnsemblBacteriaiCAG22277; CAG22277; PBPRB0404
KEGGippr:PBPRB0404

Similar proteinsi

Entry informationi

Entry nameiQ6LKA3_PHOPR
AccessioniPrimary (citable) accession number: Q6LKA3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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