Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q6LKA3

- Q6LKA3_PHOPR

UniProt

Q6LKA3 - Q6LKA3_PHOPR

Protein

Alpha-amylase

Gene

VV20400

Organism
Photobacterium profundum (Photobacterium sp. (strain SS9))
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Name:VV20400Imported
    Ordered Locus Names:PBPRB0404Imported
    OrganismiPhotobacterium profundum (Photobacterium sp. (strain SS9))Imported
    Taxonomic identifieri74109 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
    ProteomesiUP000000593: Chromosome 2

    Interactioni

    Protein-protein interaction databases

    STRINGi298386.PBPRB0404.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6LKA3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000274290.
    KOiK01176.
    OMAiWQRYQPQ.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6LKA3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTSLFNTEYA STLSAPSVAT NVILHAFDWP YSKVTESAKA IADSGYKAIL    50
    VSPPLKSFHS KDGTQWWQRY QPQDYRVIDN QLGNTNDFRK MAETLNLHDI 100
    DIYADIVFNH MANESHERND LNYPNSNIIS QYKDKREYFD SIKLFGDLSQ 150
    PLFTKDDFLS AFPIKDWKDP WQVQHGRISS GGSDPGLPTL KNNKNVVKKQ 200
    KLYLKALKKI GVKGFRIDAA KHMTLDHIQE LCDEDITEGM HIFGEIITDG 250
    GATKEEYELF LQPYLEKTTL GAYDFPLFHT VLDVFNKNAS MASLINPYSL 300
    GSALENQRAI TFAITHDIPN NDVFLDQVMS EENERLAYCY ILGRDGGVPL 350
    VYTDLDTSGI KSSRDKPRWC DAWNDPILAN MIHFHNIMHC QPMAIIEQTQ 400
    DLLVFSRGEH GVVAINKGKK AVSYELPIKY SQQNRTEINE IINMEGVKLL 450
    PPSLGSETGA ILQLPAQSCA MLVS 474
    Length:474
    Mass (Da):53,598
    Last modified:July 5, 2004 - v1
    Checksum:i70615C9B6EAAF22A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378676 Genomic DNA. Translation: CAG22277.1.
    RefSeqiYP_132077.1. NC_006371.1.

    Genome annotation databases

    EnsemblBacteriaiCAG22277; CAG22277; PBPRB0404.
    GeneIDi3121878.
    KEGGippr:PBPRB0404.
    PATRICi22939202. VBIPhoPro109272_4169.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378676 Genomic DNA. Translation: CAG22277.1 .
    RefSeqi YP_132077.1. NC_006371.1.

    3D structure databases

    ProteinModelPortali Q6LKA3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 298386.PBPRB0404.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAG22277 ; CAG22277 ; PBPRB0404 .
    GeneIDi 3121878.
    KEGGi ppr:PBPRB0404.
    PATRICi 22939202. VBIPhoPro109272_4169.

    Phylogenomic databases

    HOGENOMi HOG000274290.
    KOi K01176.
    OMAi WQRYQPQ.
    OrthoDBi EOG6RZB1B.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SS9Imported.

    Entry informationi

    Entry nameiQ6LKA3_PHOPR
    AccessioniPrimary (citable) accession number: Q6LKA3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3