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Q6LKA1

- GLGA_PHOPR

UniProt

Q6LKA1 - GLGA_PHOPR

Protein

Glycogen synthase

Gene

glgA

Organism
Photobacterium profundum (Photobacterium sp. (strain SS9))
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei27 – 271ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthaseUniRule annotation
    Gene namesi
    Name:glgAUniRule annotation
    Ordered Locus Names:PBPRB0406
    OrganismiPhotobacterium profundum (Photobacterium sp. (strain SS9))
    Taxonomic identifieri74109 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
    ProteomesiUP000000593: Chromosome 2

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 508508Glycogen synthasePRO_0000230253Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi298386.PBPRB0406.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6LKA1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294940.
    KOiK00703.
    OMAiICVISRI.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6LKA1-1 [UniParc]FASTAAdd to Basket

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    MATKKTSLTK HPLKILFVSS EVEGFAKTGG LADVAKSLPA ALKKMGHDVR    50
    IVMPFYQTIN GKDNAVAILS TELLVESQPF AVSYQVMQLD EGNVPVYALD 100
    APQYYDRPEL YAENNQAYAD NGERFTFLSA ASLDLCEKLG FQPDVIHCND 150
    WHTGLIPFLL KTRYAESDFF AKSKSVITIH NAVFKGVFNY DQYSLIPELI 200
    QRRYINAEMD PSHISMLKAG VAYADKVNAV SPNYASELLT HLGSHGMEAD 250
    FQNRAKDLYG IINGCDYDDW NPETDVYIKQ KFKANKVSLA RGKKACRRDL 300
    QKQVNLPEVD VPVYGMVCRL TEQKGLHYLI PVLEDFLLND VQVVIVGTGD 350
    PTLASALRDI SEQHSDKFAF VETYSNPLAH CVEAGVDFFM MPSEFEPCGL 400
    NQMYSLAYGT LPIVRSVGGL KDTVIDYDQT PQVATGFIYD TPTPEALLIK 450
    LQRSLLLYCQ RPQEFKRLQQ NAMACKFNWD ESAEQYLDMY LGGEQSLVNE 500
    ICNDKVDA 508
    Length:508
    Mass (Da):56,993
    Last modified:July 5, 2004 - v1
    Checksum:i89AEC27330E8AB90
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378676 Genomic DNA. Translation: CAG22279.1.
    RefSeqiYP_132079.1. NC_006371.1.

    Genome annotation databases

    EnsemblBacteriaiCAG22279; CAG22279; PBPRB0406.
    GeneIDi3120142.
    KEGGippr:PBPRB0406.
    PATRICi22939206. VBIPhoPro109272_4171.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR378676 Genomic DNA. Translation: CAG22279.1 .
    RefSeqi YP_132079.1. NC_006371.1.

    3D structure databases

    ProteinModelPortali Q6LKA1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 298386.PBPRB0406.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAG22279 ; CAG22279 ; PBPRB0406 .
    GeneIDi 3120142.
    KEGGi ppr:PBPRB0406.
    PATRICi 22939206. VBIPhoPro109272_4171.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294940.
    KOi K00703.
    OMAi ICVISRI.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SS9.

    Entry informationi

    Entry nameiGLGA_PHOPR
    AccessioniPrimary (citable) accession number: Q6LKA1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 4, 2006
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3