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Q6LKA1 (GLGA_PHOPR) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:PBPRB0406
OrganismPhotobacterium profundum (Photobacterium sp. (strain SS9)) [Complete proteome] [HAMAP]
Taxonomic identifier74109 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium

Protein attributes

Sequence length508 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 508508Glycogen synthase HAMAP-Rule MF_00484
PRO_0000230253

Sites

Binding site271ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6LKA1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 89AEC27330E8AB90

FASTA50856,993
        10         20         30         40         50         60 
MATKKTSLTK HPLKILFVSS EVEGFAKTGG LADVAKSLPA ALKKMGHDVR IVMPFYQTIN 

        70         80         90        100        110        120 
GKDNAVAILS TELLVESQPF AVSYQVMQLD EGNVPVYALD APQYYDRPEL YAENNQAYAD 

       130        140        150        160        170        180 
NGERFTFLSA ASLDLCEKLG FQPDVIHCND WHTGLIPFLL KTRYAESDFF AKSKSVITIH 

       190        200        210        220        230        240 
NAVFKGVFNY DQYSLIPELI QRRYINAEMD PSHISMLKAG VAYADKVNAV SPNYASELLT 

       250        260        270        280        290        300 
HLGSHGMEAD FQNRAKDLYG IINGCDYDDW NPETDVYIKQ KFKANKVSLA RGKKACRRDL 

       310        320        330        340        350        360 
QKQVNLPEVD VPVYGMVCRL TEQKGLHYLI PVLEDFLLND VQVVIVGTGD PTLASALRDI 

       370        380        390        400        410        420 
SEQHSDKFAF VETYSNPLAH CVEAGVDFFM MPSEFEPCGL NQMYSLAYGT LPIVRSVGGL 

       430        440        450        460        470        480 
KDTVIDYDQT PQVATGFIYD TPTPEALLIK LQRSLLLYCQ RPQEFKRLQQ NAMACKFNWD 

       490        500 
ESAEQYLDMY LGGEQSLVNE ICNDKVDA 

« Hide

References

[1]"Life at depth: Photobacterium profundum genome sequence and expression analysis."
Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M., Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C., Bartlett D.H., Valle G.
Science 307:1459-1461(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SS9.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR378676 Genomic DNA. Translation: CAG22279.1.
RefSeqYP_132079.1. NC_006371.1.

3D structure databases

ProteinModelPortalQ6LKA1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING298386.PBPRB0406.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG22279; CAG22279; PBPRB0406.
GeneID3120142.
KEGGppr:PBPRB0406.
PATRIC22939206. VBIPhoPro109272_4171.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAICVISRI.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PHOPR
AccessionPrimary (citable) accession number: Q6LKA1
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways